DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012234
GeneMdm2
SynonymsMdm-2
Desc.transformed mouse 3T3 cell double minute 2
LocusNM_010786 chr10:117125961-117147772(-)
DB links


Entrez 17246
MGI 96952
Ensembl ENSMUSG00000020184
Vega OTTMUSG00000020921
Featureprotein-coding
GO(BP)
  •   24 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      protein complex assembly (GO:0006461)
      DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest (GO:0006977)
      traversing start control point of mitotic cell cycle (GO:0007089)
      positive regulation of gene expression (GO:0010628)
      negative regulation of gene expression (GO:0010629)
      negative regulation of protein processing (GO:0010955)
      protein ubiquitination (GO:0016567)
      peptidyl-lysine modification (GO:0018205)
      protein catabolic process (GO:0030163)
      protein destabilization (GO:0031648)
      positive regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032436)
      protein localization to nucleus (GO:0034504)
      regulation of protein catabolic process (GO:0042176)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0043154)
      negative regulation of DNA damage response, signal transduction by p53 class mediator (GO:0043518)
      establishment of protein localization (GO:0045184)
      positive regulation of cell cycle (GO:0045787)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      positive regulation of mitotic cell cycle (GO:0045931)
      positive regulation of protein export from nucleus (GO:0046827)
      negative regulation of cell cycle arrest (GO:0071157)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012208
(v2.0)
Mdm2NM_001288586,NM_01078617246
17.458747.268247.7225102.01449.797635.25416.8768233.37748.450646.6746
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012234
(v1.0)
Mdm217246
2-Cell Transient0.97451
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012208
(v2.0)
Mdm217246
711/3750.4092513/3750.3351414/3753.70131266/3753.078113/375-2.7015183/375-1.6263
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012208
(v2.0)
Mdm217246
436/1590.9382261/1590.5958392/1594.80051142/1594.15442/159-3.707485/159-1.4864
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012208
(v2.0)
Mdm217246
75.923416446.29
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012208
(v2.0)
Mdm217246
32.811911827.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012234
(v1.0)
Mdm2NM_01078617246
49.363533.330176.305534.82594.83705
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012234
(v1.0)
Mdm2NM_01078617246
62.438239.609198.322344.68997.09216
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012234
(v1.0)
Mdm2NM_01078617246
51.61416.5475736.3638
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012234
(v1.0)
Mdm2NM_01078617246
50.380532.995425.0543
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012234
(v1.0)
Mdm2NM_01078617246
43.171151.3845
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012234
(v1.0)
Mdm2NM_01078617246
51.64416.4578927.4787
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012234
(v1.0)
Mdm2NM_01078617246
70.64733.625833.6307
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012234
(v1.0)
Mdm2NM_01078617246
46.096153.4361
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012234
(v1.0)
Mdm2NM_01078617246
69.049171.7926
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012234
(v1.0)
Mdm2NM_01078617246
32.211643.1287
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012234
(v1.0)
8622H3069A07-3Mdm217246
U032258NAP004687-001Mdm2;TC935305,TC893794P23804U,F,23.53213.52733.80243.56782.98193.17132.9957
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012234
(v1.0)
1423605_a_atMm.22670Mdm2NM_010786.317246
519.2749.9687.525127.1182.1
0012234
(v1.0)
1427718_a_atMm.22670Mdm2NM_010786.317246
232.525427.975524.5750101.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012234
(v1.0)
A_51_P201346Mdm2NM_01078617246
1 (0.867 to 1.218)1P0.388 (0.337 to 0.442)1.49E-05P
0012234
(v1.0)
A_52_P469842Mdm2NM_01078617246
11P0.9620.767P
Proteome N/A