DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012235
GeneMdm4
SynonymsMdmx
Desc.transformed mouse 3T3 cell double minute 4
LocusNM_008575 chr1:134886422-134921925(-)
DB links


Entrez 17248
MGI 107934
Ensembl ENSMUSG00000054387
Featureprotein-coding
GO(BP)
  •   6 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      protein complex assembly (GO:0006461)
      positive regulation of cell proliferation (GO:0008284)
      negative regulation of protein catabolic process (GO:0042177)
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of cell cycle arrest (GO:0071157)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012209
(v2.0)
Mdm4NM_00857517248
3.00362386.183601.026300.31681.34928.221849.95681457.65293.84215.2558
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012235
(v1.0)
Mdm417248
Maternal RNA0.99056
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012209
(v2.0)
Mdm417248
423/2750.108301/2750.014174/2751.6643213/2750.95635/275-3.482283/275-2.3067
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012209
(v2.0)
Mdm417248
183/960.4142120/960.203770/962.9941194/962.31631/96-3.588430/96-2.2213
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012209
(v2.0)
Mdm417248
48.738212439.3
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012209
(v2.0)
Mdm417248
13.74227917.4
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012235
(v1.0)
Mdm4NM_00857517248
401.242414.956223.52356.3436.95713
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012235
(v1.0)
Mdm4NM_00857517248
1402.251154.96523.165152.39323.2859
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012235
(v1.0)
Mdm4NM_00857517248
419.5361.09845452.727
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012235
(v1.0)
Mdm4NM_00857517248
409.508410.79338.455
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012235
(v1.0)
Mdm4NM_00857517248
367.802305.933
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012235
(v1.0)
Mdm4NM_00857517248
419.781.08341371.206
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012235
(v1.0)
Mdm4NM_00857517248
206.94854.401465.1154
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012235
(v1.0)
Mdm4NM_00857517248
150.746212.756
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012235
(v1.0)
Mdm4NM_00857517248
554.089269.224
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012235
(v1.0)
Mdm4NM_00857517248
48.726248.9189
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012235
(v1.0)
7702H3052G01-3Mm.18706Mdm417248
U021768NAP000212-004Mdm4;TC908944,TC908943,TC908941O35618U,F,24.4484.75834.03153.97393.2253.30033.3662
0012235
(v1.0)
8185H3061B12-3Mm.18706Mdm417248
U021768NAP099676-001LOC270647, Mdm4TC908941,TC908939O35618U,F,24.41314.55014.21844.02463.30073.38783.3554
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012235
(v1.0)
1419558_atMm.476028Mdm4NM_008575.317248
3226.9251870.851929.42543.443.15
0012235
(v1.0)
1460542_s_atMm.476028Mdm4NM_008575.317248
870.3751815.7751582.07597.972.9
0012235
(v1.0)
1453982_atMm.476028Mdm4NM_008575.317248
529.45515.15502.25357.625472.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012235
(v1.0)
A_51_P176954Mdm4NM_00857517248
11P0.6670.154P
0012235
(v1.0)
A_51_P258566Mdm4AK04644817248
11P1.3720.195P
0012235
(v1.0)
A_52_P174937Mdm4NM_00857517248
11P1.6090.133P
0012235
(v1.0)
A_52_P485905Mdm4NM_00857517248
11P0.4950.0941P
0012235
(v1.0)
A_52_P596201Mdm4AK04644817248
11P1.0120.933P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0012235
(v1.0)
Mdm417248
1.332.6714.335.332