DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012238
GeneMe1
SynonymsD9Ertd267e
Mdh-1
Mod-1
Mod1
Desc.malic enzyme 1, NADP(+)-dependent, cytosolic
LocusNM_001198933 chr9:86474970-86581206(-)
NM_008615 chr9:86474970-86589947(-)
DB links


Entrez 17436
MGI 97043
Ensembl ENSMUSG00000032418
Featureprotein-coding
GO(BP)
GO(MF)
  •   11 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012212
(v2.0)
Me1NM_001198933,NM_00861517436
25.4047176.629264.06945.585720.515814.575417.4554206.62524.133712.0537
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012238
(v1.0)
Me117436
Minor ZGA0.96704
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012212
(v2.0)
Me117436
482/3360.0077448/3360.2989/336-1.520561/336-1.1176157/3360.9515865/3360.7631
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012212
(v2.0)
Me117436
196/155-0.173181/1550.10695/155-1.198829/155-1.061256/1550.5763355/1550.5931
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012212
(v2.0)
Me117436
66.81637095.45
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012212
(v2.0)
Me117436
26.0322796.41
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012238
(v1.0)
Me1NM_001198933,NM_00861517436
183.531182.2433.953814.213912.1613
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012238
(v1.0)
Me1NM_001198933,NM_00861517436
102.01990.993816.58946.835816.5567
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012238
(v1.0)
Me1NM_001198933,NM_00861517436
191.8989.29079198.828
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012238
(v1.0)
Me1NM_001198933,NM_00861517436
187.312180.411153.026
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012238
(v1.0)
Me1NM_001198933,NM_00861517436
92.402175.2075
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012238
(v1.0)
Me1NM_001198933,NM_00861517436
192.019.16353167.833
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012238
(v1.0)
Me1NM_001198933,NM_00861517436
31.435913.724116.7375
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012238
(v1.0)
Me1NM_001198933,NM_00861517436
6.762027.81189
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012238
(v1.0)
Me1NM_001198933,NM_00861517436
37.078618.8313
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012238
(v1.0)
Me1NM_001198933,NM_00861517436
15.698145.4345
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012238
(v1.0)
6297H3022F06-3Mod117436
U031160NAP093771-001Mod1;TC913725P06801U,F,23.06253.17753.05242.85722.70872.85732.9584
0012238
(v1.0)
19312L0265D12-3Mm.148155Mod117436
U031160NAP093771-001Mod1;TC913727,TC913724P06801U,F,23.76844.38113.72893.50493.38293.55673.9607
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012238
(v1.0)
1416632_atMm.148155Me1NM_001198933.1,NM_008615.217436
1313.7752586.675817.90291.725
0012238
(v1.0)
1430307_a_atMm.148155Me1NM_001198933.1,NM_008615.217436
1378.5252182.851030.125232.575422.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012238
(v1.0)
A_51_P186601Mod1M2954617436
11P0.9450.676P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0012238
(v1.0)
Me117436
21.3313.331.331