DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012256
GeneMed17
SynonymsCrsp6
Trap80
Desc.mediator complex subunit 17
LocusNM_144933 chr9:15064795-15084311(-)
DB links


Entrez 234959
MGI 2182585
Ensembl ENSMUSG00000031935
Featureprotein-coding
GO(BP)
  •   9 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      transcription initiation from RNA polymerase II promoter (GO:0006367)
      stem cell maintenance (GO:0019827)
      intracellular steroid hormone receptor signaling pathway (GO:0030518)
      androgen receptor signaling pathway (GO:0030521)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012230
(v2.0)
Med17NM_144933234959
4.50487156.21162.516120.949654.06289.7423912.0272.271750.33149.92669
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012256
(v1.0)
Med17234959
Maternal RNA0.97496
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012230
(v2.0)
Med17234959
751/4630.1846460/463-0.1253161/4632.0487412/4631.158614/463-2.9031142/463-2.2923
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012230
(v2.0)
Med17234959
321/2030.1476210/203-0.067157/2033.1558392/2032.26664/203-3.314956/203-2.4259
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012230
(v2.0)
Med17234959
68.682512057.24
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012230
(v2.0)
Med17234959
21.30217030.43
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012256
(v1.0)
Med17NM_144933234959
162.33943.302115.605837.53688.52387
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012256
(v1.0)
Med17NM_144933234959
987.971210.60367.0731222.88253.0406
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012256
(v1.0)
Med17NM_144933234959
169.741.6474847.2436
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012256
(v1.0)
Med17NM_144933234959
165.68342.867453.6981
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012256
(v1.0)
Med17NM_144933234959
321.137193.844
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012256
(v1.0)
Med17NM_144933234959
169.8391.6249158.8943
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012256
(v1.0)
Med17NM_144933234959
14.448536.243334.9036
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012256
(v1.0)
Med17NM_144933234959
245.185177.757
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012256
(v1.0)
Med17NM_144933234959
28.1429.04209
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012256
(v1.0)
Med17NM_144933234959
2.576756.20936
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012256
(v1.0)
6700H3031G01-3Mm.44151Crsp6234959
U030496NAP005296-001Crsp6;TC815195U3.43913.36373.35113.72823.46053.5553.3874
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012256
(v1.0)
A_52_P3412Crsp6NM_144933234959
11P0.4380.0859P
Proteome N/A