DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012260
GeneMed21
SynonymsD6Ertd782e
Srb7
Surb7
Desc.mediator complex subunit 21
LocusNM_025315 chr6:146591101-146599122(+)
DB links


Entrez 108098
MGI 1347064
Ensembl ENSMUSG00000030291
Vega OTTMUSG00000025704
Featureprotein-coding
GO(BP)
  •   6 Terms
      blastocyst development (GO:0001824)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      transcription from RNA polymerase II promoter (GO:0006366)
      stem cell maintenance (GO:0019827)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012234
(v2.0)
Med21NM_025315108098
15.0277132.747139.23364.0905105.84269.398653.462776.6175103.7777.7672
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012260
(v1.0)
Med21108098
Maternal RNA0.92492
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012234
(v2.0)
Med21108098
677/3600.3974482/3600.3041595/3604.28061478/3603.359815/360-2.4507161/360-1.7508
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012234
(v2.0)
Med21108098
391/1870.5489232/1870.1939584/1875.15581411/1874.228610/187-2.061470/187-1.9938
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012234
(v2.0)
Med21108098
47.784510545.51
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012234
(v2.0)
Med21108098
14.27536920.69
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012260
(v1.0)
Med21NM_025315108098
137.87596.523947.799573.554237.5719
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012260
(v1.0)
Med21NM_025315108098
179.218116.13260.574490.857446.9839
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012260
(v1.0)
Med21NM_025315108098
144.1615.49579105.31
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012260
(v1.0)
Med21NM_025315108098
140.71595.554756.6486
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012260
(v1.0)
Med21NM_025315108098
117.92164.4234
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012260
(v1.0)
Med21NM_025315108098
144.2445.4205262.1302
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012260
(v1.0)
Med21NM_025315108098
44.254971.019571.8019
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012260
(v1.0)
Med21NM_025315108098
89.874189.886
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012260
(v1.0)
Med21NM_025315108098
61.354212.894
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012260
(v1.0)
Med21NM_025315108098
195.583213.709
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012260
(v1.0)
9287H3079B11-3Mm.26212Surb7108098
U007575NAP003721-001Surb7;TC893563,TC871550Q9CQ39U,F2.58092.6442.57082.55822.61392.55672.5802
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012260
(v1.0)
1425806_a_atMm.26212Med21NM_025315.3108098
309.8350.45241.6110.8150.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012260
(v1.0)
A_51_P396708Surb7NM_025315108098
11P0.7880.259P
Proteome N/A