DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012261
GeneMed22
SynonymsSurf-5
Surf5
Desc.mediator complex subunit 22
LocusNM_011513 chr2:26760787-26766162(-)
NM_001033908 chr2:26760787-26766162(-)
DB links


Entrez 20933
MGI 98446
Ensembl ENSMUSG00000015776
Vega OTTMUSG00000011738
Featureprotein-coding
GO(BP)
  •   3 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
GO(MF)
  •   1 Terms
      RNA polymerase II transcription cofactor activity (GO:0001104)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012235
(v2.0)
Med22NM_001033908,NM_01151320933
25.893122.105113.62140.909366.965716.754417.116188.13957.562318.852
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012261
(v1.0)
Med2220933
Maternal RNA0.96844
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012235
(v2.0)
Med2220933
703/576-0.2249420/576-0.5707360/5762.8969993/5762.11224/576-4.8006100/576-3.1062
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012235
(v2.0)
Med2220933
338/2240.0804203/224-0.257312/2244.0076828/2243.2030/224-5.776145/224-2.8735
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012235
(v2.0)
Med2220933
106.577218657.3
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012235
(v2.0)
Med2220933
29.45689531.01
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012261
(v1.0)
Med22NM_001033908,NM_01151320933
126.95678.731230.450646.531312.1303
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012261
(v1.0)
Med22NM_001033908,NM_01151320933
189.65111.58436.942758.742914.5173
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012261
(v1.0)
Med22NM_001033908,NM_01151320933
132.7449.4678885.8974
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012261
(v1.0)
Med22NM_001033908,NM_01151320933
129.57277.9406139.326
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012261
(v1.0)
Med22NM_001033908,NM_01151320933
113.835184.815
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012261
(v1.0)
Med22NM_001033908,NM_01151320933
132.8229.33821152.808
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012261
(v1.0)
Med22NM_001033908,NM_01151320933
28.192544.927839.8002
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012261
(v1.0)
Med22NM_001033908,NM_01151320933
59.075152.817
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012261
(v1.0)
Med22NM_001033908,NM_01151320933
36.84932.16349
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012261
(v1.0)
Med22NM_001033908,NM_01151320933
211.719133.362
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012261
(v1.0)
11928H3128A05-3Mm.3434Surf520933
U022432NAP094462-001Surf5;TC842073,TC842069Q62276U,F,24.76314.94575.30825.12064.8875.0284.885
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012261
(v1.0)
1421528_a_atMm.397932Med22NM_011513.2,NM_001033908.120933
560.95853.85126.9500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012261
(v1.0)
A_51_P141554Surf5NM_01151320933
11P0.6760.159P
0012261
(v1.0)
A_52_P17194Surf5NM_01151320933
11P1.3130.263P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0012261
(v1.0)
Med2220933
010010