DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012264
GeneMed25
SynonymsESTM2
Desc.mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)
LocusNM_029365 chr7:52134756-52147736(-)
DB links


Entrez 75613
MGI 1922863
Ensembl ENSMUSG00000002968
Featureprotein-coding
GO(BP)
  •   8 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      positive regulation of chromatin binding (GO:0035563)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      negative regulation of fibroblast proliferation (GO:0048147)
      positive regulation of cell cycle arrest (GO:0071158)
      positive regulation of mediator complex assembly (GO:2001178)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012238
(v2.0)
Med25NM_02936575613
38.527733.38554.214423.583216.457726.740710.005589.213615.447424.4064
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012264
(v1.0)
Med2575613
Minor ZGA0.98202
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012238
(v2.0)
Med2575613
649/497-0.1276377/497-0.5136148/4971.8283452/4971.190311/497-3.3264141/497-2.4044
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012238
(v2.0)
Med2575613
310/1990.1261181/199-0.251693/1992.4336302/1991.91977/199-2.608767/199-2.1449
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012238
(v2.0)
Med2575613
68.098217638.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012238
(v2.0)
Med2575613
20.37848025.47
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012264
(v1.0)
Med25NM_02936575613
34.728937.632917.564511.37586.96615
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012264
(v1.0)
Med25NM_02936575613
374.662359.976152.327123.0665.2017
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012264
(v1.0)
Med25NM_02936575613
36.312214.0941.0583
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012264
(v1.0)
Med25NM_02936575613
35.444337.255166.1887
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012264
(v1.0)
Med25NM_02936575613
336.423448.05
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012264
(v1.0)
Med25NM_02936575613
36.333313.89772.5935
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012264
(v1.0)
Med25NM_02936575613
16.26210.983810.7268
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012264
(v1.0)
Med25NM_02936575613
99.472196.4044
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012264
(v1.0)
Med25NM_02936575613
3.865568.51487
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012264
(v1.0)
Med25NM_02936575613
42.212250.4552
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012264
(v1.0)
2672C0351C04-3Mm.1577782610034E13Rik75613
U028504NAP101067-12610034E13Rik;TC886522,TC886520,TC886516,TC886514Q9CSY5U,F4.20324.01833.43453.73283.50843.68343.6291
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012264
(v1.0)
1453197_atMm.157778Med25NM_029365.275613
868.250460.9500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012264
(v1.0)
A_51_P392861Med25NM_02936575613
11P2.0020.0909P
0012264
(v1.0)
A_52_P119082Med25AK09002675613
11P0.980.881P
0012264
(v1.0)
A_52_P632227Med25NM_02936575613
11P1.4790.159P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0012264
(v1.0)
Med2575613
010010