DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012266
GeneMed27
SynonymsCrsp8
D2Ertd434e
Desc.mediator complex subunit 27
LocusNM_026896 chr2:29202356-29380308(+)
DB links


Entrez 68975
MGI 1916225
Ensembl ENSMUSG00000026799
Vega OTTMUSG00000011597
Featureprotein-coding
GO(BP)
  •   4 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      stem cell maintenance (GO:0019827)
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012240
(v2.0)
Med27NM_001290489,NM_026896,NM_02961568975
5.66127172.755238.161120.807121.0669.924166.588259.486104.36411.8699
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012266
(v1.0)
Med2768975
Minor ZGA0.94912
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012240
(v2.0)
Med2768975
559/440-0.1671411/440-0.214169/4402.1899398/4401.1819130/4400.2963823/4400.3034
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012240
(v2.0)
Med2768975
232/1460.1543183/1460.2083163/1463.6536377/1462.67925/146-0.4722167/146-0.4023
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012240
(v2.0)
Med2768975
78.028813259.11
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012240
(v2.0)
Med2768975
20.04887227.85
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012266
(v1.0)
Med27NM_02689668975
132.749121.38785.685281.94054.55341
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012266
(v1.0)
Med27NM_02689668975
2011.961531.29375.46133.0858.15826
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012266
(v1.0)
Med27NM_02689668975
138.8012.12599132.436
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012266
(v1.0)
Med27NM_02689668975
135.484120.169142.971
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012266
(v1.0)
Med27NM_02689668975
230.992343.353
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012266
(v1.0)
Med27NM_02689668975
138.8822.09687156.805
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012266
(v1.0)
Med27NM_02689668975
79.331279.116869.8572
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012266
(v1.0)
Med27NM_02689668975
101.48290.2101
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012266
(v1.0)
Med27NM_02689668975
87.806270.7382
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012266
(v1.0)
Med27NM_02689668975
604.34471.801
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012266
(v1.0)
10783H3103E04-3Mm.248591500015J03Rik68975
U001557NAP011637-0011500015J03Rik;TC794257Q9DB40U,F3.2953.37873.07593.07272.60672.8452.5341
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012266
(v1.0)
1432462_a_atMm.330109Med27NM_026896.468975
255.65452.625481.3298.850
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012266
(v1.0)
A_51_P116027Crsp8NM_02689668975
11P0.7950.261P
0012266
(v1.0)
A_52_P171964Crsp8NM_02689668975
11P0.7070.179P
Proteome N/A