DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012272
GeneMed6
Synonyms
Desc.mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
LocusNM_027213 chr12:82674551-82695945(-)
DB links


Entrez 69792
MGI 1917042
Ensembl ENSMUSG00000002679
Vega OTTMUSG00000034947
Featureprotein-coding
GO(BP)
  •   5 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      stem cell maintenance (GO:0019827)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012246
(v2.0)
Med6NM_02721369792
9.4584292.280862.446108.153163.15123.607916.262248.2724117.64627.043
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012272
(v1.0)
Med669792
MGA0.89731
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012246
(v2.0)
Med669792
483/2910.2175376/2910.2527129/2912.3796526/2912.1756130/2910.8858634/2910.5226
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012246
(v2.0)
Med669792
228/1360.231165/1360.1615127/1363.3903505/1363.200436/1360.1363172/136-0.2585
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012246
(v2.0)
Med669792
45.227110244.34
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012246
(v2.0)
Med669792
15.71567221.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012272
(v1.0)
Med6NM_02721369792
95.881143.111680.4863112.90111.5117
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012272
(v1.0)
Med6FR070198,FR301376,NM_02721369792
126.54777.671196.0741139.2514.8724
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012272
(v1.0)
Med6NM_02721369792
100.2533.4590447.0357
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012272
(v1.0)
Med6NM_02721369792
97.856442.678735.7893
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012272
(v1.0)
Med6FR070198,FR301376,NM_02721369792
78.906844.0734
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012272
(v1.0)
Med6NM_02721369792
100.3113.4116639.2525
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012272
(v1.0)
Med6NM_02721369792
74.5178109.01181.278
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012272
(v1.0)
Med6FR070198,FR301376,NM_02721369792
137.749101.863
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012272
(v1.0)
Med6NM_02721369792
56.5309111.592
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012272
(v1.0)
Med6NM_02721369792
17.110222.5091
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012272
(v1.0)
9170H3077D08-3Mm.285821500012F11Rik69792
U034141NAP007130-001TC938569,TC864773Q921D4U,F,22.81312.88383.09563.18162.94613.01942.9432
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012272
(v1.0)
1424264_atMm.279993Med6NM_027213.269792
308.45187.55254.825363.375111.8
0012272
(v1.0)
1458343_x_atMm.279993Med6NM_027213.269792
1022.475468.2689.351456.5597.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012272
(v1.0)
A_51_P332359Med6NM_02721369792
11P1.7460.113P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0012272
(v1.0)
Med669792
010010