DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012297
GeneMen1
Synonymsmenin
Desc.multiple endocrine neoplasia 1
LocusNM_001168488 chr19:6334979-6340894(+)
NM_001168489 chr19:6335013-6340894(+)
NM_001168490 chr19:6335039-6340894(+)
NM_008583 chr19:6335039-6340894(+)
DB links


Entrez 17283
MGI 1316736
Ensembl ENSMUSG00000024947
Vega OTTMUSG00000018611
Featureprotein-coding
GO(BP)
  •   42 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      MAPK cascade (GO:0000165)
      ossification (GO:0001503)
      leukocyte homeostasis (GO:0001776)
      negative regulation of protein phosphorylation (GO:0001933)
      osteoblast fate commitment (GO:0002051)
      osteoblast development (GO:0002076)
      chromatin remodeling (GO:0006338)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      response to DNA damage stimulus (GO:0006974)
      cell cycle arrest (GO:0007050)
      negative regulation of cell proliferation (GO:0008285)
      response to UV (GO:0009411)
      embryo development (GO:0009790)
      response to gamma radiation (GO:0010332)
      chromatin modification (GO:0016568)
      histone methylation (GO:0016571)
      hemopoiesis (GO:0030097)
      positive regulation of transforming growth factor beta receptor signaling pathway (GO:0030511)
      positive regulation of histone methylation (GO:0031062)
      positive regulation of protein binding (GO:0032092)
      regulation of activin receptor signaling pathway (GO:0032925)
      histone lysine methylation (GO:0034968)
      positive regulation of apoptotic process (GO:0043065)
      positive regulation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0043280)
      negative regulation of sequence-specific DNA binding transcription factor activity (GO:0043433)
      positive regulation of cell differentiation (GO:0045597)
      negative regulation of osteoblast differentiation (GO:0045668)
      positive regulation of osteoblast differentiation (GO:0045669)
      negative regulation of cyclin-dependent protein kinase activity (GO:0045736)
      negative regulation of cell cycle (GO:0045786)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      negative regulation of JNK cascade (GO:0046329)
      negative regulation of organ growth (GO:0046621)
      embryonic skeletal system morphogenesis (GO:0048704)
      positive regulation of cell division (GO:0051781)
      negative regulation of telomerase activity (GO:0051974)
      palate development (GO:0060021)
      maternal process involved in female pregnancy (GO:0060135)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012272
(v2.0)
Men1NM_001168488,NM_001168489,NM_001168490,NM_00858317283
10.178834.853919.35175.867479.0604815.753531.629633.069810.767214.6506
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012297
(v1.0)
Men117283
Maternal RNA0.9441
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012272
(v2.0)
Men117283
618/540-0.3175342/540-0.773371/5400.6621190/540-0.174817/540-2.8602193/540-2.0751
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012272
(v2.0)
Men117283
269/218-0.2085160/218-0.559360/2181.6855145/2180.73648/218-2.567878/218-2.061
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012272
(v2.0)
Men117283
97.012816957.4
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012272
(v2.0)
Men117283
20.31927527.09
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012297
(v1.0)
Men1NM_001168488,NM_001168489,NM_001168490,NM_00858317283
36.255913.44764.361486.2371222.3451
SOLiD_NMNR_Oo-4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012297
(v1.0)
Men1NM_001168488,NM_001168489,NM_001168490,NM_00858317283
37.90893.7203514.6717
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012297
(v1.0)
Men1NM_001168488,NM_001168489,NM_001168490,NM_00858317283
37.002813.312624.547
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012297
(v1.0)
Men1NM_001168488,NM_001168489,NM_001168490,NM_00858317283
22.65158.0192
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012297
(v1.0)
Men1NM_001168488,NM_001168489,NM_001168490,NM_00858317283
37.93093.669426.9223
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012297
(v1.0)
Men1NM_001168488,NM_001168489,NM_001168490,NM_00858317283
4.038056.022197.44097
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012297
(v1.0)
Men1NM_001168488,NM_001168489,NM_001168490,NM_00858317283
7.03428.67285
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012297
(v1.0)
Men1NM_001168488,NM_001168489,NM_001168490,NM_00858317283
13.28796.43231
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012297
(v1.0)
Men1NM_001168488,NM_001168489,NM_001168490,NM_00858317283
0.2572880.575271
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012297
(v1.0)
18713L0223G11-3Mm.12917Men117283
U038691NAP099834-001Men1;TC880819,TC880817O885593.58483.54173.59583.82743.61883.69543.6343
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012297
(v1.0)
1416347_atMm.12917Men1NM_008583.2,NM_001168490.1,NM_001168488.1,NM_001168489.117283
118.9750063.02545.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012297
(v1.0)
A_51_P293077Men1NM_00858317283
11P1.6870.162P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0012297
(v1.0)
Men117283
020030