DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013140
GeneMms19
SynonymsC86341
Mms19
Mms19l
Desc.MMS19 (MET18 S. cerevisiae)
LocusNM_028152 chr19:42018197-42055626(-)
DB links


Entrez 72199
MGI 1919449
Ensembl ENSMUSG00000025159
Vega OTTMUSG00000035800
Featureprotein-coding
GO(BP)
GO(MF)
  •   2 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2013584
(v2.0)
Mms19NM_02815272199
18.74241.63613.84313.181216.16821.09422.639917.827814.901922.0107
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013140
(v1.0)
Mms1972199
Maternal RNA0.99267
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013584
(v2.0)
Mms1972199
992/4600.5948602/4600.2714803/4604.36912088/4603.506559/460-0.8938488/460-0.5128
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013584
(v2.0)
Mms1972199
587/1531.4211334/1531.0054742/1535.77081744/1534.819425/153-0.5379214/153-0.1145
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013584
(v2.0)
Mms1972199
62.447214941.91
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013584
(v2.0)
Mms1972199
9.62578910.82
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013140
(v1.0)
Mms19NM_02815272199
43.29069.598399.8085811.205716.005
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013140
(v1.0)
Mms19FR398264,NM_02815272199
800.928103.755155.141170.461316.77
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013140
(v1.0)
Mms19NM_02815272199
45.26436.8541510.4721
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013140
(v1.0)
Mms19NM_02815272199
44.18249.5020113.2327
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013140
(v1.0)
Mms19FR398264,NM_02815272199
184.793301.574
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013140
(v1.0)
Mms19NM_02815272199
45.29066.7602714.5132
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013140
(v1.0)
Mms19NM_02815272199
9.0812110.819510.3323
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013140
(v1.0)
Mms19FR398264,NM_02815272199
233.543192.311
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013140
(v1.0)
Mms19NM_02815272199
9.386953.93453
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013140
(v1.0)
Mms19NM_02815272199
2.893981.80909
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013140
(v1.0)
13056H3157E07-3Mm.28412Mms19l72199
U039044NAP098421-001Mms19l;TC942011,TC843807,TC833092,TC810724Q925N83.23093.11333.19953.16353.23573.19183.2171
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013140
(v1.0)
1417967_atMm.218940Mms19NM_028152.372199
148.2500098.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013140
(v1.0)
A_51_P281855Mms19lNM_02815272199
11P0.8420.378P
0013140
(v1.0)
A_52_P214936Mms19lAK02984072199
11P1.0710.669P
0013140
(v1.0)
A_52_P74427Mms19lNM_02815272199
11P0.5380.148P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013140
(v1.0)
Mms1972199
75.50.518200.5