DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013300
GeneMrpl48
SynonymsCGI-118
D4Ertd786e
Desc.mitochondrial ribosomal protein L48
LocusNM_198831 chr7:107697631-107731644(-)
NR_003559 chr7:107697631-107756510(-)
DB links


Entrez 52443
MGI 1289321
Ensembl ENSMUSG00000030706
Vega OTTMUSG00000025231
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2013753
(v2.0)
Mrpl48NM_198831,NR_00355952443
29.8724185.378158.89512.725625.959521.312712.7732166.98725.741323.1284
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013300
(v1.0)
Mrpl4852443
Maternal RNA0.99567
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013753
(v2.0)
Mrpl4852443
533/3230.2092425/3230.278945/3230.736126/323-0.026675/323-0.0482422/323-0.2129
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013753
(v2.0)
Mrpl4852443
222/159-0.0311185/1590.101740/1591.5396115/1590.853712/159-1.591979/159-1.5901
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013753
(v2.0)
Mrpl4852443
36.86248543.37
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013753
(v2.0)
Mrpl4852443
9.57965617.11
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013300
(v1.0)
Mrpl48NM_19883152443
185.936107.4549.3785318.00259.11218
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013300
(v1.0)
Mrpl48FR193122,NM_198831,NR_00355952443
172.114220.38332.537632.129549.2667
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013300
(v1.0)
Mrpl48NM_19883152443
194.41410.6327117.235
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013300
(v1.0)
Mrpl48NM_19883152443
189.767106.375121.258
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013300
(v1.0)
Mrpl48FR193122,NM_198831,NR_00355952443
469.918102.646
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013300
(v1.0)
Mrpl48NM_19883152443
194.52710.4871132.991
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013300
(v1.0)
Mrpl48NM_19883152443
8.6830617.382117.8214
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013300
(v1.0)
Mrpl48FR193122,NM_198831,NR_00355952443
7.971428.46017
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013300
(v1.0)
Mrpl48NM_19883152443
93.00137.183
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013300
(v1.0)
Mrpl48NM_19883152443
10.40527.11002
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013300
(v1.0)
6087H3015H12-3Mm.227275D4Ertd786e52443
U028915NAP000200-001TC881257,TC881254,TC881253,TC881252Q9CVL1U,F,22.87993.06062.92272.83992.97412.93452.8817
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013300
(v1.0)
1428302_atMm.473730Mrpl48NM_198831.252443
1575.1251355.45725.575241.075174.475
0013300
(v1.0)
1437997_x_atMm.473730Mrpl48NM_198831.252443
1176.525973.675728.15302.325200.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013300
(v1.0)
A_52_P413116Mrpl48NM_02697152443
11P0.7840.252P
Proteome N/A