DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013340
GeneMrto4
SynonymsMrt4
Desc.MRT4, mRNA turnover 4, homolog (S. cerevisiae)
LocusNM_023536 chr4:138903360-138908213(-)
DB links


Entrez 69902
MGI 1917152
Ensembl ENSMUSG00000028741
Vega OTTMUSG00000009954
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2013794
(v2.0)
Mrto4NM_001290810,NM_02353669902
23.196958.162235.6843110.141161.539107.19719.410358.7597188.904149.969
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013340
(v1.0)
Mrto469902
MGA0.94045
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013794
(v2.0)
Mrto469902
714/4810.057435/481-0.2606218/4812.43438/4811.191915/481-2.8645142/481-2.3472
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013794
(v2.0)
Mrto469902
332/2100.1473214/210-0.0885210/2103.5269415/2102.30035/210-3.099862/210-2.3314
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013794
(v2.0)
Mrto469902
102.252116860.86
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013794
(v2.0)
Mrto469902
33.6019734.64
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013340
(v1.0)
Mrto4NM_02353669902
80.342531.6186106.973150.08218.5601
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013340
(v1.0)
Mrto4NM_02353669902
36.442322.324677.000374.112.7002
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013340
(v1.0)
Mrto4NM_02353669902
84.005511.182134.4965
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013340
(v1.0)
Mrto4NM_02353669902
81.997731.301154.7733
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013340
(v1.0)
Mrto4NM_02353669902
173.23547.5532
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013340
(v1.0)
Mrto4NM_02353669902
84.054311.028960.0735
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013340
(v1.0)
Mrto4NM_02353669902
99.0401144.91175.854
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013340
(v1.0)
Mrto4NM_02353669902
78.133685.3306
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013340
(v1.0)
Mrto4NM_02353669902
25.348267.0126
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013340
(v1.0)
Mrto4NM_02353669902
7.914273.48958
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013340
(v1.0)
9331H3079G03-3Mm.278712610012O22Rik69902
U025701NAP097510-001TC930448Q99JR7U,F,22.59282.84692.88853.21122.71552.9082.5683
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013340
(v1.0)
1423823_atMm.441201Mrto469902
000578.7381.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013340
(v1.0)
A_51_P1581612610012O22RikNM_02353669902
11P0.5310.151P
Proteome N/A