DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013365
GeneMsh3
SynonymsD13Em1
Rep-3
Rep3
Desc.mutS homolog 3 (E. coli)
LocusNM_010829 chr13:92981836-93124958(-)
DB links


Entrez 17686
MGI 109519
Ensembl ENSMUSG00000014850
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2013819
(v2.0)
Msh3NM_01082917686
3.091533.950938.059612.112814.20753.092128.8930632.44115.29734.06567
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013365
(v1.0)
Msh317686
Maternal RNA0.95589
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013819
(v2.0)
Msh317686
590/429-0.053455/429-0.0312220/4292.6039469/4291.454540/429-1.3434270/429-1.2627
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013819
(v2.0)
Msh317686
251/183-0.0567188/183-0.0769214/1833.7409445/1832.596814/183-1.5835123/183-1.1627
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013819
(v2.0)
Msh317686
54.617710452.52
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013819
(v2.0)
Msh317686
15.83036125.95
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013365
(v1.0)
Msh3NM_01082917686
35.278626.31529.022749.879646.28568
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013365
(v1.0)
Msh3NM_01082917686
46.484631.459411.17312.70058.07708
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013365
(v1.0)
Msh3NM_01082917686
36.8871.1305928.7105
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013365
(v1.0)
Msh3NM_01082917686
36.005426.05124.0178
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013365
(v1.0)
Msh3NM_01082917686
31.947228.7402
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013365
(v1.0)
Msh3NM_01082917686
36.90841.1151126.3419
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013365
(v1.0)
Msh3NM_01082917686
8.353659.5391910.6014
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013365
(v1.0)
Msh3NM_01082917686
12.562913.9798
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013365
(v1.0)
Msh3NM_01082917686
17.63682.99359
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013365
(v1.0)
Msh3NM_01082917686
10.35095.88931
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013365
(v1.0)
1824C0259G01-3Mm.116254Msh317686
U035020NAP007150-002Msh3;TC815458,TC815457,TC815456P13705U,F,23.42343.40582.80062.87112.27542.56732.3494
0013365
(v1.0)
16722K0446C12-3Mm.116254Msh317686
U035020NAP007150-002Msh3;TC815458,TC815457P13705U,F,22.78162.55532.60082.46232.44522.57972.4743
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013365
(v1.0)
1422261_a_atMm.343101Msh3NM_010829.217686
47.5544.745.0500
0013365
(v1.0)
1424166_atMm.343101Msh3NM_010829.217686
793.275514.15752.42500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013365
(v1.0)
A_51_P454166Msh3NM_01082917686
11P0.3730.0836P
0013365
(v1.0)
A_52_P54561Msh3NM_01082917686
11P1.3240.217P
Proteome N/A