DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0013371

Gene

Msl1

Synonyms

Description

male-specific lethal 1 homolog (Drosophila)

Locus

NM_028722 UCSC: chr11:98657083-98669173(+) OLP: chr11:98657083-98669173(+)

DB links

Entrez 74026
MGI 1921276
Ensembl ENSMUSG00000052915
Vega OTTMUSG00000006405

Feature

protein-coding

GO_BP

2 Terms

GO_MF

GO_CC

2 Terms

KEGG

see DBTMEE:2013825 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0013371 (v1.0)	Msl1	NM_028722	74026	32.2638	28.9925	12.528	10.6354	11.5038

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0013371 (v1.0)	Msl1	NM_028722	74026	33.7347	9.45958	31.6315

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0013371 (v1.0)	Msl1	NM_028722	74026	32.9284	28.7014	27.3682

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0013371 (v1.0)	Msl1	NM_028722	74026	33.7543	9.33001	30.0165

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0013371 (v1.0)	Msl1	NM_028722	74026	11.599	10.2689	13.2159

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0013371 (v1.0)	Msl1	NM_028722	74026	61.7858	11.8629

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0013371 (v1.0)	Msl1	NM_028722	74026	28.316	38.8433

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0013371 (v1.0)	8805	H3072D04-3	Mm.30252	4121402D02Rik	74026			4121402D02Rik				2.7753	2.6104	2.742	2.6044	2.6801	2.5205	2.6217
0013371 (v1.0)	13025	H3156H08-3	Mm.30252	4121402D02Rik	74026	U013312	NAP093525-001	4121402D02Rik;4930463F05Rik;	TC813982	Q9CXF9	U,F,2	2.8785	3.0078	2.6521	2.5783	2.2391	2.3908	2.364

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0013371 (v1.0)	1428871_at	Mm.258352	Msl1	NM_028722.2	74026	409.4	545.65	302.575	264.85	188.925
0013371 (v1.0)	1434481_at	Mm.258352	Msl1	NM_028722.2	74026	0	0	0	0	99.95

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0013371 (v1.0)	A_51_P380249	4121402D02Rik	NM_028722	74026	1	1	P	0.722	0.189	P
0013371 (v1.0)	A_52_P64601	4121402D02Rik	NM_028722	74026	1	1	P	0.356	0.0626	P

N/A