DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013371
GeneMsl1
Synonyms
Desc.male-specific lethal 1 homolog (Drosophila)
LocusNM_028722 chr11:98657083-98669173(+)
DB links


Entrez 74026
MGI 1921276
Ensembl ENSMUSG00000052915
Vega OTTMUSG00000006405
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2013825
(v2.0)
Msl1NM_02872274026
25.866331.037941.751616.837715.34748.9438216.322736.939919.05217.16622
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013371
(v1.0)
Msl174026
Minor ZGA0.99723
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013825
(v2.0)
Msl174026
868/4410.4632463/441-0.0459330/4413.148880/4412.321410/441-3.281151/441-2.1344
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013825
(v2.0)
Msl174026
504/1441.2886219/1440.4858291/1444.5042714/1443.61824/144-2.831373/144-1.5598
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013825
(v2.0)
Msl174026
96.14620946
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013825
(v2.0)
Msl174026
16.312812513.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013371
(v1.0)
Msl1NM_02872274026
32.263828.992512.52810.635411.5038
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013371
(v1.0)
Msl1NM_02872274026
115.42489.795166.320189.684454.4129
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013371
(v1.0)
Msl1NM_02872274026
33.73479.4595831.6315
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013371
(v1.0)
Msl1NM_02872274026
32.928428.701427.3682
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013371
(v1.0)
Msl1NM_02872274026
344.021139.125
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013371
(v1.0)
Msl1NM_02872274026
33.75439.3300130.0165
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013371
(v1.0)
Msl1NM_02872274026
11.59910.268913.2159
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013371
(v1.0)
Msl1NM_02872274026
130.60785.4837
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013371
(v1.0)
Msl1NM_02872274026
61.785811.8629
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013371
(v1.0)
Msl1NM_02872274026
28.31638.8433
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013371
(v1.0)
8805H3072D04-3Mm.302524121402D02Rik74026
4121402D02Rik2.77532.61042.7422.60442.68012.52052.6217
0013371
(v1.0)
13025H3156H08-3Mm.302524121402D02Rik74026
U013312NAP093525-0014121402D02Rik;4930463F05Rik;TC813982Q9CXF9U,F,22.87853.00782.65212.57832.23912.39082.364
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013371
(v1.0)
1428871_atMm.258352Msl1NM_028722.274026
409.4545.65302.575264.85188.925
0013371
(v1.0)
1434481_atMm.258352Msl1NM_028722.274026
000099.95
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013371
(v1.0)
A_51_P3802494121402D02RikNM_02872274026
11P0.7220.189P
0013371
(v1.0)
A_52_P646014121402D02RikNM_02872274026
11P0.3560.0626P
Proteome N/A