DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013445
GeneMtmr3
SynonymsFYVE-DSP1
ZFYVE10
Desc.myotubularin related protein 3
LocusNM_028860 chr11:4380871-4494818(-)
DB links


Entrez 74302
MGI 1921552
Ensembl ENSMUSG00000034354
Vega OTTMUSG00000005070
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2013896
(v2.0)
Mtmr3NM_02886074302
16.07815.571219.968539.122824.638913.750813.636218.350220.278912.3578
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013445
(v1.0)
Mtmr374302
2-Cell Transient0.99072
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013896
(v2.0)
Mtmr374302
651/3320.4575467/3320.375190/3322.7517526/3321.98715/332-2.3352155/332-1.6886
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013896
(v2.0)
Mtmr374302
382/1620.7213255/1620.5355175/1623.6164499/1622.9353/162-3.318787/162-1.4802
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013896
(v2.0)
Mtmr374302
41.63998946.79
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013896
(v2.0)
Mtmr374302
13.47735823.24
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013445
(v1.0)
Mtmr3NM_02886074302
16.191813.857729.122217.07049.53405
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013445
(v1.0)
Mtmr3FR183356,NM_02886074302
119.385.0256215.73111.91263.529
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013445
(v1.0)
Mtmr3NM_02886074302
16.935.879915.119
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013445
(v1.0)
Mtmr3NM_02886074302
16.525413.718513.6147
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013445
(v1.0)
Mtmr3FR183356,NM_02886074302
170.999180.721
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013445
(v1.0)
Mtmr3NM_02886074302
16.93995.7993714.9322
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013445
(v1.0)
Mtmr3NM_02886074302
26.962616.482214.0231
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013445
(v1.0)
Mtmr3FR183356,NM_02886074302
201.619116.779
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013445
(v1.0)
Mtmr3NM_02886074302
4.314435.60153
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013445
(v1.0)
Mtmr3NM_02886074302
7.501078.55031
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013445
(v1.0)
12867H3153G05-3Mm.200412Mtmr374302
U032447NAP032268-1Mtmr3;TC814920Q9CVQ1U,F,23.76713.51413.02823.30332.56472.78932.767
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013445
(v1.0)
1427117_atMm.425669Mtmr3NM_028860.274302
109.75118.55153.075164.375110.55
0013445
(v1.0)
1434042_s_atMm.425669Mtmr3NM_028860.274302
1530.1252116.551780.051627.6751374.15
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013445
(v1.0)
A_51_P150195Mtmr3NM_02886074302
11P0.01*0.0151P
0013445
(v1.0)
A_52_P175699Mtmr3AK12226174302
11P0.9030.494P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013445
(v1.0)
Mtmr374302
010010