DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013456
GeneMtr
Synonymsmethionine synthase
MS
Desc.5-methyltetrahydrofolate-homocysteine methyltransferase
LocusNM_001081128 chr13:12278807-12350380(-)
DB links


Entrez 238505
MGI 894292
Ensembl ENSMUSG00000021311
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   4 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2013907
(v2.0)
MtrNM_001081128238505
5.0085911.417120.552511.46859.915174.20587.0464717.592510.45913.72798
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013456
(v1.0)
Mtr238505
1-Cell Transient0.98045
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013907
(v2.0)
Mtr238505
549/3760.0332414/3760.0226122/3761.9432289/3760.94746/376-0.9581181/376-1.6459
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013907
(v2.0)
Mtr238505
258/1620.1576165/162-0.0892116/1623.0274244/1621.905812/162-1.618272/162-1.7481
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013907
(v2.0)
Mtr238505
47.06812039.22
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013907
(v2.0)
Mtr238505
6.0457698.76
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013456
(v1.0)
MtrNM_001081128238505
11.842714.61718.603917.122394.99459
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013456
(v1.0)
MtrNM_001081128238505
230.287205.63188.6351152.97490.6272
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013456
(v1.0)
MtrNM_001081128238505
12.38271.9037615.9476
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013456
(v1.0)
MtrNM_001081128238505
12.086714.470413.6575
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013456
(v1.0)
MtrNM_001081128238505
307.478239.219
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013456
(v1.0)
MtrNM_001081128238505
12.38991.8776914.9791
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013456
(v1.0)
MtrNM_001081128238505
7.965886.876957.51879
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013456
(v1.0)
MtrNM_001081128238505
106.124126.291
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013456
(v1.0)
MtrNM_001081128238505
5.501971.43071
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013456
(v1.0)
MtrNM_001081128238505
1.211321.04168
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013456
(v1.0)
A_51_P408310MtrXM_138431238505
11P0.8280.449P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013456
(v1.0)
Mtr238505
130140