DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013587
GeneMyo1c
SynonymsC80397
mm1beta
myosin-Ibeta
myr2
Desc.myosin IC
LocusNM_008659 chr11:75465011-75488136(+)
NM_001080774 chr11:75465652-75488136(+)
NM_001080775 chr11:75469517-75488136(+)
DB links


Entrez 17913
MGI 106612
Ensembl ENSMUSG00000017774
Vega OTTMUSG00000006212
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014041
(v2.0)
Myo1cNM_001080774,NM_001080775,NM_00865917913
33.034756.211798.324948.639319.748513.4745146.775102.70122.498111.8615
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013587
(v1.0)
Myo1c17913
Minor ZGA0.91815
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014041
(v2.0)
Myo1c17913
944/5630.2325384/563-0.6667233/5632.3037795/5631.824530/563-2.1356192/563-2.1426
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014041
(v2.0)
Myo1c17913
376/2170.2791145/217-0.6937134/2172.8378453/2172.379615/217-1.7312104/217-1.6462
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014041
(v2.0)
Myo1c17913
40.093520619.46
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014041
(v2.0)
Myo1c17913
9.2181969.6
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013587
(v1.0)
Myo1cNM_001080774,NM_001080775,NM_00865917913
58.43568.231336.216213.7093104.03
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013587
(v1.0)
Myo1cNM_001080774,NM_001080775,NM_00865917913
1119.281397.23547.58249.9371907.72
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013587
(v1.0)
Myo1cNM_001080774,NM_001080775,NM_00865917913
61.099212.081174.4418
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013587
(v1.0)
Myo1cNM_001080774,NM_001080775,NM_00865917913
59.638867.546276.0669
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013587
(v1.0)
Myo1cNM_001080774,NM_001080775,NM_00865917913
1318.781434.85
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013587
(v1.0)
Myo1cNM_001080774,NM_001080775,NM_00865917913
61.134711.915783.4276
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013587
(v1.0)
Myo1cNM_001080774,NM_001080775,NM_00865917913
33.530513.236815.6325
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013587
(v1.0)
Myo1cNM_001080774,NM_001080775,NM_00865917913
485.304562.826
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013587
(v1.0)
Myo1cNM_001080774,NM_001080775,NM_00865917913
17.98838.45708
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013587
(v1.0)
Myo1cNM_001080774,NM_001080775,NM_00865917913
26.889918.5525
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013587
(v1.0)
1146C0181B05-3Mm.25194Myo1c17913
U012957NAP005411-001Myo1c;TC804597Q9ERB6U,F2.5582.80822.86192.74152.5162.68272.8476
0013587
(v1.0)
3213C0620C05-3Mm.1458Myo1c17913
U033086NAP046275-1MMIb;O090402.2862.26052.22572.35472.2752.20142.3569
MOE430 N/A
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013587
(v1.0)
Myo1c17913
410410