DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013596
GeneMyo5b
Synonyms
Desc.myosin VB
LocusNM_201600 chr18:74602273-74931131(+)
DB links


Entrez 17919
MGI 106598
Ensembl ENSMUSG00000025885
Vega OTTMUSG00000029560
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014050
(v2.0)
Myo5bNM_20160017919
9.71942128.231109.05315.95758.019330.1788340121.66313.45560.135688
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013596
(v1.0)
Myo5b17919
Maternal RNA0.99706
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014050
(v2.0)
Myo5b17919
813/4460.3527560/4460.2117141/4461.9112572/4461.6847745/4462.78652907/4462.1026
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014050
(v2.0)
Myo5b17919
498/2050.7648318/2050.5151137/2052.9471505/2052.6172425/2053.0841549/2052.3127
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014050
(v2.0)
Myo5b17919
33.275318018.49
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014050
(v2.0)
Myo5b17919
6.91281275.44
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013596
(v1.0)
Myo5bNM_20160017919
133.28575.48611.87245.564880
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013596
(v1.0)
Myo5bFR233237,NM_20160017919
4408.631196.51180.651134.8890
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013596
(v1.0)
Myo5bNM_20160017919
139.3613.5544982.3569
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013596
(v1.0)
Myo5bNM_20160017919
136.03174.728190.0589
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013596
(v1.0)
Myo5bFR233237,NM_20160017919
882.89875.293
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013596
(v1.0)
Myo5bNM_20160017919
139.4423.5058198.7736
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013596
(v1.0)
Myo5bNM_20160017919
10.9925.373119.40357
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013596
(v1.0)
Myo5bFR233237,NM_20160017919
66.8827132.958
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013596
(v1.0)
Myo5bNM_20160017919
105.0335.9975
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013596
(v1.0)
Myo5bNM_20160017919
7.7825.59963
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013596
(v1.0)
11154H3109B10-3Mm.21322U018896NAP106422-1Myo5b;TC865143P21271U,F,23.75583.41323.01983.09083.41533.16763.392
0013596
(v1.0)
17687L0006G07-3Mm.3536Myo5b17919
U018896NAP097458-001Myo5b;TC865143,TC865142P21271U,F,23.52773.58733.21153.08893.03113.09993.4062
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013596
(v1.0)
1452298_a_atMm.260098Myo5bNM_201600.217919
666.625313.35305.60193.95
0013596
(v1.0)
1437698_atMm.260098Myo5bNM_201600.217919
1706.9751237.9735.8250763.45
0013596
(v1.0)
1441104_atMm.260098Myo5bNM_201600.217919
2092.4753844.2000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013596
(v1.0)
A_51_P105879Myo5bNM_20160017919
11P0.7930.281P
0013596
(v1.0)
A_52_P600600Myo5bNM_20160017919
11P1.3330.306P
0013596
(v1.0)
A_52_P66130Myo5bAK03348417919
11P0.7680.23P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013596
(v1.0)
Myo5b17919
1725318385