DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013662
GeneNae1
SynonymsAppbp1
Desc.NEDD8 activating enzyme E1 subunit 1
LocusNM_144931 chr8:107034928-107058537(-)
DB links


Entrez 234664
MGI 2384561
Ensembl ENSMUSG00000031878
Vega OTTMUSG00000029165
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014116
(v2.0)
Nae1NM_144931234664
6.7096541.411865.73714.966716.415610.203813.203643.582223.45288.41819
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013662
(v1.0)
Nae1234664
Minor ZGA0.98796
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014116
(v2.0)
Nae1234664
568/467-0.2298407/467-0.3138161/4672.0366376/4671.014785/467-0.396503/467-0.491
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014116
(v2.0)
Nae1234664
286/226-0.1723182/226-0.4264158/2263.0183354/2261.966810/226-2.329357/226-2.5552
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014116
(v2.0)
Nae1234664
58.397613742.63
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014116
(v2.0)
Nae1234664
10.5438612.26
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013662
(v1.0)
Nae1NM_144931234664
43.013645.3611.133611.39389.29445
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013662
(v1.0)
Nae1FR326899,NM_144931234664
842.4871320.5162.017189.105136.282
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013662
(v1.0)
Nae1NM_144931234664
44.97462.4537949.4887
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013662
(v1.0)
Nae1NM_144931234664
43.899744.904532.2752
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013662
(v1.0)
Nae1FR326899,NM_144931234664
3863.231216.88
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013662
(v1.0)
Nae1NM_144931234664
45.00082.4201835.3983
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013662
(v1.0)
Nae1NM_144931234664
10.30811.001116.2574
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013662
(v1.0)
Nae1FR326899,NM_144931234664
198.634330.325
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013662
(v1.0)
Nae1NM_144931234664
25.96064.17813
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013662
(v1.0)
Nae1NM_144931234664
59.927469.5805
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013662
(v1.0)
5053G0120E01-3Mm.21396Appbp1234664
U030158NAP011397-001Appbp1;TC925514U,F,23.70073.83213.02542.85782.90192.99342.9497
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013662
(v1.0)
1423781_atMm.237670Nae1NM_144931.3234664
2859.8253212.21041.325575.475898.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013662
(v1.0)
A_51_P200838Appbp1NM_144931234664
11P0.4560.0805P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013662
(v1.0)
Nae1234664
111131