DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013688
GeneNapa
Synonymsa-SNAP
hyh
RA81
SNAPA
SNARE
Desc.N-ethylmaleimide sensitive fusion protein attachment protein alpha
LocusNM_025898 chr7:16683992-16703324(+)
DB links


Entrez 108124
MGI 104563
Ensembl ENSMUSG00000006024
Vega OTTMUSG00000023922
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014142
(v2.0)
NapaNM_025898108124
67.447516.085318.016912.693113.679430.847222.041625.845111.085334.9759
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013688
(v1.0)
Napa108124
1-Cell Transient0.94939
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014142
(v2.0)
Napa108124
822/602-0.0633467/602-0.4816662/6023.71151443/6022.587590/602-0.678773/602-0.2382
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014142
(v2.0)
Napa108124
385/2480.1212248/248-0.1157597/2484.8021263/2483.66637/248-2.9204120/248-1.6344
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014142
(v2.0)
Napa108124
64.824611655.88
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014142
(v2.0)
Napa108124
10.41786017.36
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013688
(v1.0)
NapaNM_025898108124
16.721412.5119.44159.475415.5515
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013688
(v1.0)
NapaNM_025898108124
506.994316.402179.185118.407283.56
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013688
(v1.0)
NapaNM_025898108124
17.483824.666213.6497
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013688
(v1.0)
NapaNM_025898108124
17.065912.385419.1838
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013688
(v1.0)
NapaNM_025898108124
154.749298.993
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013688
(v1.0)
NapaNM_025898108124
17.493924.328421.0402
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013688
(v1.0)
NapaNM_025898108124
8.741369.148887.67572
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013688
(v1.0)
NapaNM_025898108124
111.853201.519
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013688
(v1.0)
NapaNM_025898108124
0.7109910.3103
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013688
(v1.0)
NapaNM_025898108124
1.278270.583452
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013688
(v1.0)
5039G0120B02-3Mm.104540Napa108124
U007700NAP094006-001Napa;TC874561Q9CXX1U,F,23.34883.34523.53913.47443.50723.5743.5758
0013688
(v1.0)
15419K0140A11-3Mm.104540Napa108124
U007700NAP094006-001Napa;TC874561Q9CXX1U,F,22.48122.37822.6143.13912.80912.93912.7782
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013688
(v1.0)
1448243_atMm.104540NapaNM_025898.3108124
000203.375338
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013688
(v1.0)
A_51_P246816NapaNM_025898108124
11P0.9340.702P
0013688
(v1.0)
A_52_P336033NapaNM_025898108124
11P0.4780.112P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013688
(v1.0)
Napa108124
573685