DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013712
GeneNav3
SynonymsPOMFIL1
Pomfil1p
steerin 3
unc53H3
Desc.neuron navigator 3
LocusNM_001081035 chr10:109120495-109437275(-)
DB links


Entrez 260315
MGI 2183703
Ensembl ENSMUSG00000020181
Vega OTTMUSG00000034560
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014164
(v2.0)
Nav3NM_001081035260315
0.55268517.125134.603718.41896.489750.02134610.88471541.48837.736360.0281274
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013712
(v1.0)
Nav3260315
Minor ZGA0.99184
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014164
(v2.0)
Nav3260315
436/2490.2943386/2490.51454/249-2.105788/249-0.167545/249-0.4026195/249-0.9466
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014164
(v2.0)
Nav3260315
182/970.3915150/970.50832/97-1.583927/97-0.498220/97-0.210489/97-0.714
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014164
(v2.0)
Nav3260315
42.32525084.65
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014164
(v2.0)
Nav3260315
20.18842774.77
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013712
(v1.0)
Nav3NM_001081035260315
17.802523.91213.70234.495180.615252
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013712
(v1.0)
Nav3FR051113,FR153547,FR338743,FR400755,NM_001081035260315
61.456279.861843.313611.8982.22652
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013712
(v1.0)
Nav3NM_001081035260315
18.61420.20212326.0885
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013712
(v1.0)
Nav3NM_001081035260315
18.169323.671930.6655
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013712
(v1.0)
Nav3FR051113,FR153547,FR338743,FR400755,NM_001081035260315
81.2693110.814
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013712
(v1.0)
Nav3NM_001081035260315
18.6250.19935433.6329
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013712
(v1.0)
Nav3NM_001081035260315
12.68624.340285.36259
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013712
(v1.0)
Nav3FR051113,FR153547,FR338743,FR400755,NM_001081035260315
13.570510.95
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013712
(v1.0)
Nav3NM_001081035260315
14.42898.89161
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013712
(v1.0)
Nav3NM_001081035260315
1.795762.67991
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013712
(v1.0)
1456144_atMm.225050Nav3NM_001081035.1260315
694.825897.375764.90432.3
0013712
(v1.0)
1442918_atMm.225050Nav3NM_001081035.1260315
315.15422.675311.325176.5198.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013712
(v1.0)
A_52_P627327Nav3XM_618813260315
11P0.8170.291P
Proteome N/A