DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013724
GeneNcapd2
SynonymsCAP-D2
CNAP1
Desc.non-SMC condensin I complex, subunit D2
LocusNM_146171 chr6:125118025-125141604(-)
DB links


Entrez 68298
MGI 1915548
Ensembl ENSMUSG00000038252
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014176
(v2.0)
Ncapd2NM_14617168298
3.955857.168249.4874847.956425.87660.856950.64686.5923718.196257.2024
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013724
(v1.0)
Ncapd268298
2-Cell Transient0.99036
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014176
(v2.0)
Ncapd268298
595/4090.0279393/409-0.1733217/4092.6511520/4091.671621/409-2.1734158/409-1.9613
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014176
(v2.0)
Ncapd268298
258/1530.2396155/153-0.0968211/1533.9615503/1533.02767/153-2.238349/153-2.2075
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014176
(v2.0)
Ncapd268298
72.878615148.26
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014176
(v2.0)
Ncapd268298
21.4819722.15
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013724
(v1.0)
Ncapd2NM_14617168298
7.455696.5915435.65817.936536.1048
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013724
(v1.0)
Ncapd2NM_146171,NR_02851768298
121.235159.329823.844586.6821041.37
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013724
(v1.0)
Ncapd2NM_14617168298
7.795611.44677.19151
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013724
(v1.0)
Ncapd2NM_14617168298
7.609286.525354.90096
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013724
(v1.0)
Ncapd2NM_14617168298
118.29666.3763
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013724
(v1.0)
Ncapd2NM_14617168298
7.800141.426885.37521
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013724
(v1.0)
Ncapd2NM_14617168298
33.013717.318512.6578
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013724
(v1.0)
Ncapd2NM_146171,NR_02851768298
670.226608.925
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013724
(v1.0)
Ncapd2NM_14617168298
4.4944111.2557
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013724
(v1.0)
Ncapd2NM_14617168298
2.331222.38064
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013724
(v1.0)
11691H3121E11-3Mm.1534572810406C15Rik68298
U027863NAP096592-0012810406C15Rik;TC847471,TC847470Q9CS25U,F,23.72653.55273.54083.57483.99843.68383.935
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013724
(v1.0)
1423847_atMm.257590Ncapd2NM_146171.168298
30.60168.952.75129.3
0013724
(v1.0)
1430010_atMm.257590Ncapd2NM_146171.168298
00212.425177.025294.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013724
(v1.0)
A_51_P2020742810406C15RikNM_14617168298
11P1.2320.284P
0013724
(v1.0)
A_52_P1393992810406C15RikNM_14617168298
11P1.8920.104P
Proteome N/A