DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013725
GeneNcapd3
Synonyms
Desc.non-SMC condensin II complex, subunit D3
LocusNM_178113 chr9:26837760-26902900(+)
DB links


Entrez 78658
MGI 2142989
Ensembl ENSMUSG00000035024
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014177
(v2.0)
Ncapd3NM_17811378658
3.6505325.544918.742111.550514.314313.049511.574212.72715.36312.1008
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013725
(v1.0)
Ncapd378658
Maternal RNA0.93577
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014177
(v2.0)
Ncapd378658
689/483-0.0003445/483-0.2339190/4832.2268379/4830.9778196/4830.7516855/4830.2241
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014177
(v2.0)
Ncapd378658
384/2030.4051206/203-0.0946178/2033.3358357/2032.13280/2030.703398/2030.3703
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014177
(v2.0)
Ncapd378658
41.682315227.42
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014177
(v2.0)
Ncapd378658
7.88731136.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013725
(v1.0)
Ncapd3NM_17811378658
26.550413.00718.612549.954038.13483
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013725
(v1.0)
Ncapd3NM_17811378658
717.941297.183225.706277.511181.018
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013725
(v1.0)
Ncapd3NM_17811378658
27.76091.3350414.1911
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013725
(v1.0)
Ncapd3NM_17811378658
27.097412.87659.42983
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013725
(v1.0)
Ncapd3NM_17811378658
364.599214.632
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013725
(v1.0)
Ncapd3NM_17811378658
27.77711.3167510.3423
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013725
(v1.0)
Ncapd3NM_17811378658
7.973879.6110210.6401
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013725
(v1.0)
Ncapd3NM_17811378658
546.19812.359
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013725
(v1.0)
Ncapd3NM_17811378658
5.325483.63961
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013725
(v1.0)
Ncapd3NM_17811378658
2.844394.32135
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013725
(v1.0)
1434426_atMm.251777Ncapd3NM_178113.378658
302.775316.1179.1159169.8
0013725
(v1.0)
1430782_atMm.251777Ncapd3NM_178113.378658
0251.95000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013725
(v1.0)
A_51_P431669B130055D15RikNM_17811378658
11P0.6750.159P
Proteome N/A