DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013740
GeneNckap1
SynonymsH19
Hem-2
Hem2
mh19
Nap1
Desc.NCK-associated protein 1
LocusNM_016965 chr2:80341452-80421122(-)
DB links


Entrez 50884
MGI 1355333
Ensembl ENSMUSG00000027002
Vega OTTMUSG00000013373
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Regulation of actin cytoskeleton (mmu04810)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014192
(v2.0)
Nckap1NM_001290745,NM_01696550884
15.779241.44393.100997.881574.940318.366272.353173.246564.606817.4377
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013740
(v1.0)
Nckap150884
Minor ZGA0.78997
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014192
(v2.0)
Nckap150884
624/3670.2523451/3670.180774/3671.2633302/3671.045437/3672.29671826/3671.7128
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014192
(v2.0)
Nckap150884
370/1400.8846238/1400.645670/1402.5016161/1401.5162157/1402.19647/1401.6021
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014192
(v2.0)
Nckap150884
50.633511046.03
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014192
(v2.0)
Nckap150884
11.96627017.09
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013740
(v1.0)
Nckap1NM_01696550884
42.82567.45375.900954.590750.863
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013740
(v1.0)
Nckap1NM_01696550884
418.884631.314776.295607.913591.795
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013740
(v1.0)
Nckap1NM_01696550884
44.77756.3686373.5927
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013740
(v1.0)
Nckap1NM_01696550884
43.707366.775754.6188
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013740
(v1.0)
Nckap1NM_01696550884
1602.161495.38
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013740
(v1.0)
Nckap1NM_01696550884
44.80356.281459.904
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013740
(v1.0)
Nckap1NM_01696550884
70.272452.709544.5306
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013740
(v1.0)
Nckap1NM_01696550884
629.394579.196
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013740
(v1.0)
Nckap1NM_01696550884
11.834753.7967
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013740
(v1.0)
Nckap1NM_01696550884
9.304268.44795
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013740
(v1.0)
7153H3043D12-3Nckap150884
Nckap13.60423.55462.96973.24332.63562.93192.9762
0013740
(v1.0)
21970L0929F07-3Mm.25203Nckap150884
NAP055966-1TC8477282.53642.6643.03492.84122.65092.78942.572
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013740
(v1.0)
1452196_a_atMm.25203Nckap1NM_016965.250884
433.125930.61436.475444.525809.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013740
(v1.0)
A_52_P7948Nckap1NM_01696550884
11P0.7720.398P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013740
(v1.0)
Nckap150884
350390