DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013749
GeneNcoa2
SynonymsbHLHe75
D1Ertd433e
glucocorticoid receptor-interacting protein 1
Grip1
KAT13C
SRC-2
TIF-2
TIF2
TIF2/GRIP-1
Desc.nuclear receptor coactivator 2
LocusNM_008678 chr1:13129240-13364164(-)
NM_001077695 chr1:13129240-13364164(-)
DB links


Entrez 17978
MGI 1276533
Ensembl ENSMUSG00000005886
Vega OTTMUSG00000021630
Featureprotein-coding
GO(BP)
  •   8 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      signal transduction (GO:0007165)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      positive regulation of female receptivity (GO:0045925)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of glucocorticoid receptor signaling pathway (GO:2000324)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014201
(v2.0)
Ncoa2NM_001077695,NM_00867817978
12.182713.976925.448719.42045.902964.680366.5507728.60657.758866.29573
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013749
(v1.0)
Ncoa217978
Minor ZGA0.94777
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014201
(v2.0)
Ncoa217978
843/3820.6278482/3820.2187144/3822.1584304/3820.99750/382-0.8629333/382-0.7946
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014201
(v2.0)
Ncoa217978
549/1581.2787267/1580.6375140/1583.3301268/1582.076211/158-1.6986147/158-0.6978
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014201
(v2.0)
Ncoa217978
52.554317929.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014201
(v2.0)
Ncoa217978
9.62061208.02
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013749
(v1.0)
Ncoa2NM_001077695,NM_00867817978
14.531917.598714.42484.093054.51031
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013749
(v1.0)
Ncoa2NM_001077695,NM_00867817978
208.865296.446212.129111.36742.8253
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013749
(v1.0)
Ncoa2NM_001077695,NM_00867817978
15.19444.4548119.2005
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013749
(v1.0)
Ncoa2NM_001077695,NM_00867817978
14.831317.42221.1594
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013749
(v1.0)
Ncoa2NM_001077695,NM_00867817978
231.296298.451
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013749
(v1.0)
Ncoa2NM_001077695,NM_00867817978
15.20334.393823.2069
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013749
(v1.0)
Ncoa2NM_001077695,NM_00867817978
13.35513.9525.36274
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013749
(v1.0)
Ncoa2NM_001077695,NM_00867817978
39.849357.1041
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013749
(v1.0)
Ncoa2NM_001077695,NM_00867817978
41.766736.8587
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013749
(v1.0)
Ncoa2NM_001077695,NM_00867817978
12.12912.7519
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013749
(v1.0)
5164AF000582.1Mm.2537Ncoa217978
U021128NAP098910-001Ncoa2;TC936597Q61026U,F,22.38112.69742.39412.37522.24672.26132.2033
0013749
(v1.0)
7771H3053G03-3Mm.2537Ncoa217978
U021128NAP098910-001Ncoa2;TC936597Q61026U,F,23.73563.4853.41983.25254.26013.7354.1537
0013749
(v1.0)
10149H3091G04-3Mm.2537Ncoa217978
U021128NAP098910-001Ncoa2;TC936597Q61026U,F,23.35093.18722.82262.77532.74462.54322.7265
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013749
(v1.0)
1435233_atMm.2537Ncoa2NM_008678.2,NM_001077695.117978
448.3377.325550.450297.25
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013749
(v1.0)
A_51_P478593Ncoa2NM_00867817978
11P1.1650.39P
0013749
(v1.0)
A_52_P21971Ncoa2BC05338717978
11P0.9850.916P
0013749
(v1.0)
A_52_P335636Ncoa2AK02896417978
11P0.5490.217P
Proteome N/A