DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013750
GeneNcoa3
SynonymsAIB1
bHLHe42
KAT13B
pCIP
RAC3
Src3
TRAM-1
TRAM1
Desc.nuclear receptor coactivator 3
LocusNM_008679 chr2:165818137-165898742(+)
DB links


Entrez 17979
MGI 1276535
Ensembl ENSMUSG00000027678
Vega OTTMUSG00000001163
Featureprotein-coding
GO(BP)
  •   16 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      positive regulation of gene expression (GO:0010628)
      histone acetylation (GO:0016573)
      positive regulation of cell growth (GO:0030307)
      positive regulation of intracellular steroid hormone receptor signaling pathway (GO:0033145)
      positive regulation of intracellular estrogen receptor signaling pathway (GO:0033148)
      multicellular organism growth (GO:0035264)
      negative regulation of apoptotic process (GO:0043066)
      positive regulation of keratinocyte differentiation (GO:0045618)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      developmental growth (GO:0048589)
      positive regulation of sequence-specific DNA binding transcription factor activity (GO:0051091)
      vagina development (GO:0060068)
      mammary gland branching involved in thelarche (GO:0060744)
      regulation of RNA biosynthetic process (GO:2001141)
GO(MF)
  •   12 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014202
(v2.0)
Ncoa3NM_00867917979
9.9488286.6126136.789133.957151.09914.48464.53222170.615130.00616.7047
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013750
(v1.0)
Ncoa317979
Major ZGA0.8629
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014202
(v2.0)
Ncoa317979
818/4030.5074446/4030.03162/4032.2524444/4031.465361/403-0.6575392/403-0.6373
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014202
(v2.0)
Ncoa317979
503/1780.9819226/1780.2271153/1783.297405/1782.500630/178-0.4971206/178-0.3861
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014202
(v2.0)
Ncoa317979
69.557617140.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014202
(v2.0)
Ncoa317979
15.888411214.19
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013750
(v1.0)
Ncoa3NM_00867917979
90.05594.491599.5883104.633.19121
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013750
(v1.0)
Ncoa3NM_00867917979
514.145378.602440.299499.66918.8748
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013750
(v1.0)
Ncoa3NM_00867917979
94.16073.63838103.092
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013750
(v1.0)
Ncoa3NM_00867917979
91.910293.5427126.276
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013750
(v1.0)
Ncoa3NM_00867917979
1059.31211.44
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013750
(v1.0)
Ncoa3NM_00867917979
94.21543.58855138.495
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013750
(v1.0)
Ncoa3NM_00867917979
92.2032101.02490.0508
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013750
(v1.0)
Ncoa3NM_00867917979
540.587534.645
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013750
(v1.0)
Ncoa3NM_00867917979
51.583826.7485
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013750
(v1.0)
Ncoa3NM_00867917979
17.929819.4387
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013750
(v1.0)
15587K0209B02-3U002838NAP002762-001Ncoa3;TC870150O09000U,F,23.84793.70363.28713.90223.3273.56233.3738
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013750
(v1.0)
1422737_atMm.476883Ncoa3NM_008679.317979
186.825369.55740.225628255.9
0013750
(v1.0)
1448027_atMm.476883Ncoa3NM_008679.317979
464.475766.225535.55689.025501.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013750
(v1.0)
A_51_P454207Ncoa3NM_00867917979
11P0.5290.141P
0013750
(v1.0)
A_52_P103066Ncoa3BC08648217979
11P1.3440.207P
0013750
(v1.0)
A_52_P477759Ncoa3NM_00867917979
11P1.2180.353P
Proteome N/A