DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013751
GeneNcoa4
Synonyms
Desc.nuclear receptor coactivator 4
LocusNM_001033988 chr14:32973078-32992549(+)
NM_019744 chr14:32978978-32992549(+)
DB links


Entrez 27057
MGI 1350932
Ensembl ENSMUSG00000056234
Vega OTTMUSG00000036491
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014203
(v2.0)
Ncoa4NM_001033988,NM_001284319,NM_01974427057
75.4866133.782294.46125.432929.674445.575631.1771255.9827.535339.4512
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013751
(v1.0)
Ncoa427057
Minor ZGA0.99245
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014203
(v2.0)
Ncoa427057
691/499-0.0431392/499-0.4633106/4991.345260/4990.38948/499-1.3024410/499-0.8803
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014203
(v2.0)
Ncoa427057
291/208-0.0282144/208-0.6428101/2082.4913231/2081.47159/208-2.349371/208-2.1265
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014203
(v2.0)
Ncoa427057
69.262513252.47
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014203
(v2.0)
Ncoa427057
24.76748529.14
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013751
(v1.0)
Ncoa4NM_001033988,NM_01974427057
160.084234.67321.809123.737225.2443
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013751
(v1.0)
Ncoa4NM_001033988,NM_01974427057
1.855922.634760.140820.3023180.412379
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013751
(v1.0)
Ncoa4NM_001033988,NM_01974427057
167.38331.798256.033
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013751
(v1.0)
Ncoa4NM_001033988,NM_01974427057
163.382232.316217.987
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013751
(v1.0)
Ncoa4NM_001033988,NM_01974427057
2.67556.13563
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013751
(v1.0)
Ncoa4NM_001033988,NM_01974427057
167.4831.3625239.08
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013751
(v1.0)
Ncoa4NM_001033988,NM_01974427057
20.191922.919221.9513
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013751
(v1.0)
Ncoa4NM_001033988,NM_01974427057
0.2990380.373258
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013751
(v1.0)
Ncoa4NM_001033988,NM_01974427057
50.187648.956
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013751
(v1.0)
Ncoa4NM_001033988,NM_01974427057
58.2744139.023
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013751
(v1.0)
6576H3028F10-3Mm.28261Ncoa427057
U015473NAP090240-1Ncoa4;TC852501,TC809974Q9WV42U,F,24.57254.41433.48683.21033.24463.35363.3578
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013751
(v1.0)
1450006_atMm.371598Ncoa4NM_001033988.1,NM_019744.327057
352.475619.15210.7217.375165.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013751
(v1.0)
A_51_P151983Ncoa4NM_01974427057
11P0.7350.264P
0013751
(v1.0)
A_52_P443427Ncoa4NM_01974427057
11P1.0520.698P
Proteome N/A