DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013753
GeneNcoa6
SynonymsAIB3
ASC-2
ASC2
NRC
PRIP
RAP250
Desc.nuclear receptor coactivator 6
LocusNM_001242558 chr2:155216392-155266519(-)
NM_019825 chr2:155216392-155266519(-)
DB links


Entrez 56406
MGI 1929915
Ensembl ENSMUSG00000038369
Vega OTTMUSG00000016062
Featureprotein-coding
GO(BP)
  •   8 Terms
      DNA-dependent transcription, initiation (GO:0006352)
      response to DNA damage stimulus (GO:0006974)
      brain development (GO:0007420)
      heart development (GO:0007507)
      myeloid cell differentiation (GO:0030099)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      labyrinthine layer blood vessel development (GO:0060716)
GO(MF)
  •   7 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014205
(v2.0)
Ncoa6NM_001242558,NM_01982556406
13.391848.120787.627975.021633.9897.207856.07123115.83938.19434.4729
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013753
(v1.0)
Ncoa656406
Minor ZGA0.98581
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014205
(v2.0)
Ncoa656406
438/2760.1529419/2760.484610/276-1.110117/276-2.620414/276-2.165460/276-2.7702
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014205
(v2.0)
Ncoa656406
166/810.517167/810.91932/81-1.35528/81-1.88284/81-2.032411/81-3.3113
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014205
(v2.0)
Ncoa656406
45.42854992.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014205
(v2.0)
Ncoa656406
19.20832191.47
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013753
(v1.0)
Ncoa6NM_01982556406
31.16737.383935.254315.33464.16544
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013753
(v1.0)
Ncoa6FR050817,NM_01982556406
114.519112.86982.414542.05788.86439
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013753
(v1.0)
Ncoa6NM_01982556406
32.5884.3921240.7867
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013753
(v1.0)
Ncoa6NM_01982556406
31.809137.008653.391
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013753
(v1.0)
Ncoa6FR050817,NM_01982556406
80.6312148.226
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013753
(v1.0)
Ncoa6NM_01982556406
32.60694.3319658.5575
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013753
(v1.0)
Ncoa6NM_01982556406
32.6414.806117.4975
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013753
(v1.0)
Ncoa6FR050817,NM_01982556406
41.606552.9414
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013753
(v1.0)
Ncoa6NM_01982556406
27.71684.8096
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013753
(v1.0)
Ncoa6NM_01982556406
15.232220.0256
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013753
(v1.0)
7087H3041G04-3Mm.27592Ncoa656406
Ncoa63.49663.30652.51392.75642.33742.26942.5128
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013753
(v1.0)
1423374_atMm.27592Ncoa6NM_019825.256406
368.2730.025660.875144.7124.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013753
(v1.0)
A_51_P521128Ncoa6NM_01982556406
11P0.7710.234P
0013753
(v1.0)
A_52_P245487Ncoa6NM_01982556406
11P1.3750.193P
Proteome N/A