DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013755
GeneNcor1
SynonymsN-CoR
Rxrip13
Desc.nuclear receptor co-repressor 1
LocusNM_011308 chr11:62129928-62252017(-)
NM_001252313 chr11:62129928-62252017(-)
NM_177229 chr11:62214879-62270834(-)
DB links


Entrez 20185
MGI 1349717
Ensembl ENSMUSG00000018501
Vega OTTMUSG00000005855
Featureprotein-coding
GO(BP)
  •   18 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (GO:0002361)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      positive regulation of cell proliferation (GO:0008284)
      negative regulation of gene expression (GO:0010629)
      negative regulation of phosphatidylinositol 3-kinase cascade (GO:0014067)
      thalamus development (GO:0021794)
      positive regulation of histone deacetylation (GO:0031065)
      circadian regulation of gene expression (GO:0032922)
      regulation of multicellular organism growth (GO:0040014)
      cholesterol homeostasis (GO:0042632)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      negative regulation of JNK cascade (GO:0046329)
      regulation of catalytic activity (GO:0050790)
      spindle assembly (GO:0051225)
      definitive erythrocyte differentiation (GO:0060318)
      regulation of glycolysis by negative regulation of transcription from RNA polymerase II promoter (GO:0072362)
      regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter (GO:0072368)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014207
(v2.0)
Ncor1NM_001252313,NM_011308,NM_17722920185
14.87289.7612922.815616.807814.880816.059524.989725.540913.315611.5606
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013755
(v1.0)
Ncor120185
Minor ZGA0.9275
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014207
(v2.0)
Ncor120185
720/2930.7822483/2930.6032289/2933.5277706/2932.589811/293-2.5724105/293-2.0641
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014207
(v2.0)
Ncor120185
448/1521.0417267/1520.693283/1524.3921651/1523.40843/152-3.229159/152-1.9375
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014207
(v2.0)
Ncor120185
38.166515025.44
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014207
(v2.0)
Ncor120185
9.33621177.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013755
(v1.0)
Ncor1NM_01130820185
9.3582214.561510.49666.8878613.997
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013755
(v1.0)
Ncor1NM_01130820185
28.876432.870531.961236.158362.6204
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013755
(v1.0)
Ncor1NM_01130820185
9.784874.990215.887
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013755
(v1.0)
Ncor1NM_01130820185
9.5510114.415317.9504
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013755
(v1.0)
Ncor1NM_01130820185
90.3732201.976
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013755
(v1.0)
Ncor1NM_01130820185
9.790564.9218519.6874
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013755
(v1.0)
Ncor1NM_01130820185
9.718196.650516.50548
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013755
(v1.0)
Ncor1NM_01130820185
43.992333.3396
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013755
(v1.0)
Ncor1NM_01130820185
14.366320.6681
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013755
(v1.0)
Ncor1NM_01130820185
5.236547.51093
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013755
(v1.0)
3328C0640A07-3Mm.216273U032901NAP000053-005Ncor1;TC893336Q60974U,F,22.90743.0353.25593.02912.5592.77552.7348
0013755
(v1.0)
8682H3070A10-3Mm.88061Ncor120185
U032901NAP095522-001Ncor1;TC819665Q60974U,F,23.17873.17633.18273.03322.94542.99123.1509
0013755
(v1.0)
15463K0147D08-3Mm.217948U032901NAP034106-1Ncor1;TC944114Q60974U,F,22.22332.31952.51682.37322.53752.39272.4411
0013755
(v1.0)
16220K0343F10-3Mm.233989U043179NAP031204-1Ncor1;TC886060Q60974U,F,23.23423.09153.28823.19493.37943.28973.3161
0013755
(v1.0)
17074K0531E09-3Mm.166546U032901NAP123754-1Ncor1;TC816234Q60974U,F,22.88112.60732.74492.58763.10572.94412.9673
0013755
(v1.0)
17202K0542B03-3Mm.217132U032901NAP035780-1Ncor1;TC916633Q60974U,F,21.87842.16681.33542.02821.93241.96952.0272
0013755
(v1.0)
17225K0543F03-3Mm.88061Ncor120185
2.51522.61682.92152.48172.47242.6172.5895
0013755
(v1.0)
17579K0647H10-3Mm.217132U032901NAP040417-1Ncor1;TC844550Q60974U,F,22.73262.60942.94572.79772.94632.85472.7748
0013755
(v1.0)
19239L0259F09-3Mm.88061Ncor120185
U032901NAP095509-001Ncor1;TC893338,TC893337,TC827114Q60974U,F,23.26793.02432.79883.03622.7233.08613.3031
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013755
(v1.0)
1423200_atMm.271814Ncor1NM_011308.220185
56.675086.050215.8
0013755
(v1.0)
1444760_atMm.271814Ncor1NM_011308.220185
000037.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013755
(v1.0)
A_51_P457744Ncor1AK03850220185
11P1.5180.174P
0013755
(v1.0)
A_52_P244895Ncor1AK03581320185
11P1.6510.177P
0013755
(v1.0)
A_52_P487598Ncor1NM_01130820185
11P0.4820.0931P
0013755
(v1.0)
A_52_P561927Ncor1NM_01130820185
11P0.7770.314P
0013755
(v1.0)
A_52_P561934Ncor1NM_01130820185
11P0.8780.417P
Proteome N/A