DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013761
GeneNcstn
SynonymsD1Dau13e
Nct
nicastrin
Desc.nicastrin
LocusNM_021607 chr1:173996144-174012880(-)
DB links


Entrez 59287
MGI 1891700
Ensembl ENSMUSG00000003458
Vega OTTMUSG00000021508
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014211
(v2.0)
NcstnNM_02160759287
99.309525.873220.62374.8021311.412226.400838.701520.55769.8267321.1195
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013761
(v1.0)
Ncstn59287
Maternal RNA0.94558
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014211
(v2.0)
Ncstn59287
566/3830.0505412/383-0.0109208/3832.6822398/3831.380911/383-2.95474/383-2.9456
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014211
(v2.0)
Ncstn59287
248/1450.2598185/1450.2338202/1453.9705381/1452.7048/145-1.99325/145-3.0604
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014211
(v2.0)
Ncstn59287
69.064912654.81
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014211
(v2.0)
Ncstn59287
22.91627829.38
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013761
(v1.0)
NcstnNM_02160759287
26.900214.25643.582437.9024127.4061
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013761
(v1.0)
NcstnNM_02160759287
775.642371.41189.2865198.29620.688
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013761
(v1.0)
NcstnNM_02160759287
28.126736.318515.554
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013761
(v1.0)
NcstnNM_02160759287
27.454414.113215.2308
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013761
(v1.0)
NcstnNM_02160759287
359.516343.629
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013761
(v1.0)
NcstnNM_02160759287
28.14335.821116.7046
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013761
(v1.0)
NcstnNM_02160759287
3.316777.630096.82006
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013761
(v1.0)
NcstnNM_02160759287
204.939205.621
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013761
(v1.0)
NcstnNM_02160759287
5.413922.79468
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013761
(v1.0)
NcstnNM_02160759287
12.749114.7653
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013761
(v1.0)
5918H3012F08-3Mm.143819Ncstn-pending59287
U022065NAP000623-002Ncstn;TC853376,TC853374,TC853369P57716U,F3.31983.19262.94452.81832.91212.95882.9826
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013761
(v1.0)
1418570_atMm.218203NcstnNM_021607.359287
000054.3
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013761
(v1.0)
Ncstn59287
413617