DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013765
GeneNdel1
SynonymsmNudel
Desc.nuclear distribution gene E-like homolog 1 (A. nidulans)
LocusNM_023668 chr11:68634949-68666633(-)
DB links


Entrez 83431
MGI 1932915
Ensembl ENSMUSG00000018736
Vega OTTMUSG00000005956
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014216
(v2.0)
Ndel1NM_02366883431
20.571291.055989.532947.918936.650216.687838.1154115.32134.800717.1458
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013765
(v1.0)
Ndel183431
Maternal RNA0.97768
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014216
(v2.0)
Ndel183431
859/4580.3937625/4580.3317940/4584.60222989/4584.030178/458-0.4907484/458-0.5183
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014216
(v2.0)
Ndel183431
487/2090.7049330/2090.5406774/2095.41032284/2094.76469/209-2.3561121/209-1.3768
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014216
(v2.0)
Ndel183431
53.748810750.23
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014216
(v2.0)
Ndel183431
9.97496116.35
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013765
(v1.0)
Ndel1NM_02366883431
94.639361.958835.671525.453127.0302
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013765
(v1.0)
Ndel1NM_02366883431
117.55970.34567.7430.866432.4813
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013765
(v1.0)
Ndel1NM_02366883431
98.9547.5230967.5984
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013765
(v1.0)
Ndel1NM_02366883431
96.588961.336785.5181
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013765
(v1.0)
Ndel1NM_02366883431
71.434197.8627
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013765
(v1.0)
Ndel1NM_02366883431
99.01157.4200593.7934
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013765
(v1.0)
Ndel1NM_02366883431
33.026224.575924.0972
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013765
(v1.0)
Ndel1NM_02366883431
30.532529.9317
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013765
(v1.0)
Ndel1NM_02366883431
43.299113.4198
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013765
(v1.0)
Ndel1NM_02366883431
6.14863.17251
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013765
(v1.0)
11288H3111B12-3Nudel-pending83431
U032947NAP096700-001Nudel;TC935237Q9ERR1U,F,23.91764.13133.53823.75983.67623.67143.769
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013765
(v1.0)
1422568_atMm.31979Ndel1NM_023668.283431
1327.451062.475668.125368.025309.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013765
(v1.0)
A_51_P350073Ndel1NM_02366883431
11P0.4540.0814P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013765
(v1.0)
Ndel183431
010010