DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013767
GeneNdfip2
SynonymsN4wbp5a
Desc.Nedd4 family interacting protein 2
LocusNM_029561 chr14:105657890-105708515(+)
NM_001190989 chr14:105657890-105708515(+)
DB links


Entrez 76273
MGI 1923523
Ensembl ENSMUSG00000053253
Vega OTTMUSG00000032794
Featureprotein-coding
GO(BP)
  •   6 Terms
      signal transduction (GO:0007165)
      negative regulation of gene expression (GO:0010629)
      positive regulation of protein ubiquitination (GO:0031398)
      negative regulation of transporter activity (GO:0032410)
      positive regulation of I-kappaB kinase/NF-kappaB cascade (GO:0043123)
      negative regulation of protein transport (GO:0051224)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014218
(v2.0)
Ndfip2NM_001190989,NM_02956176273
17.708883.289135.373815.888713.40038.703999.3523829.898714.49756.31213
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013767
(v1.0)
Ndfip276273
Maternal RNA0.97745
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014218
(v2.0)
Ndfip276273
730/3340.6137519/3340.5184191/3342.7508513/3341.9424142/3340.8161856/3340.7566
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014218
(v2.0)
Ndfip276273
357/1111.1654252/1111.0599165/1114.032431/1113.259422/111-0.2662182/1110.113
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014218
(v2.0)
Ndfip276273
66.369211756.73
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014218
(v2.0)
Ndfip276273
13.05746021.76
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013767
(v1.0)
Ndfip2NM_001190989,NM_02956176273
86.407524.38311.83819.261336.53489
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013767
(v1.0)
Ndfip2NM_001190989,NM_02956176273
1056.66328.848248.529138.03360.4545
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013767
(v1.0)
Ndfip2NM_001190989,NM_02956176273
90.3476.4756426.6024
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013767
(v1.0)
Ndfip2NM_001190989,NM_02956176273
88.187624.138221.9674
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013767
(v1.0)
Ndfip2NM_001190989,NM_02956176273
198.27856.8368
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013767
(v1.0)
Ndfip2NM_001190989,NM_02956176273
90.39956.3869424.0931
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013767
(v1.0)
Ndfip2NM_001190989,NM_02956176273
10.96028.942189.96433
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013767
(v1.0)
Ndfip2NM_001190989,NM_02956176273
93.943370.1082
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013767
(v1.0)
Ndfip2NM_001190989,NM_02956176273
70.80114.62387
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013767
(v1.0)
Ndfip2NM_001190989,NM_02956176273
55.646891.9759
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013767
(v1.0)
14227J0425C09-3Mm.28029N4wbp5a-pending76273
U041361NAP000013-004Ndfip2TC919663,TC919661U,F,23.95383.69643.51583.41033.70773.51853.6069
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013767
(v1.0)
1452066_a_atMm.290669Ndfip2NM_029561.4,NM_001190989.176273
1231.851824.225698.150274.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013767
(v1.0)
A_51_P511646Ndfip2NM_02956176273
11P0.8230.302P
0013767
(v1.0)
A_52_P141786Ndfip2NM_02956176273
11P0.9980.985P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013767
(v1.0)
Ndfip276273
00.67201.332.67