DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013785
GeneNdufa13
SynonymsCDA016
CGI-39
GRIM-19
Grim19
Desc.NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
LocusNM_023312 chr8:72418081-72426457(-)
DB links


Entrez 67184
MGI 1914434
Ensembl ENSMUSG00000036199
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014236
(v2.0)
Ndufa13NM_02331267184
164.0363.239985.1667510.514510.8888169.91247.74975.2588310.5249182.651
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013785
(v1.0)
Ndufa1367184
MGA0.90694
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014236
(v2.0)
Ndufa1367184
916/5480.228555/548-0.09771226/5484.73242944/5483.750739/548-1.7292271/548-1.6098
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014236
(v2.0)
Ndufa1367184
502/2390.5559283/2390.12711014/2395.6162067/2394.42939/239-2.5461105/239-1.7713
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014236
(v2.0)
Ndufa1367184
37.277818120.6
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014236
(v2.0)
Ndufa1367184
8.5331455.88
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013785
(v1.0)
Ndufa13NM_02331267184
3.368513.593567.82047.5240333.6508
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013785
(v1.0)
Ndufa13NM_02331267184
17.352915.358937.573936.1854162.185
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013785
(v1.0)
Ndufa13NM_02331267184
3.5220859.98973.92065
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013785
(v1.0)
Ndufa13NM_02331267184
3.43793.557483.90239
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013785
(v1.0)
Ndufa13NM_02331267184
18.877826.3208
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013785
(v1.0)
Ndufa13NM_02331267184
3.5241359.16814.28
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013785
(v1.0)
Ndufa13NM_02331267184
7.240477.264767.296
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013785
(v1.0)
Ndufa13NM_02331267184
59.744551.8513
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013785
(v1.0)
Ndufa13NM_02331267184
5.292920.4101
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013785
(v1.0)
Ndufa13NM_02331267184
11.00427.79413
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013785
(v1.0)
11842H3123H07-3Mm.21162Grim19-pending67184
U029904NAP096356-001Grim19;TC830992,TC830990,TC830988,TC830987Q9ERS2U3.39183.44673.37053.46563.48733.45843.6485
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013785
(v1.0)
1430713_s_atMm.21162Ndufa13NM_023312.267184
374.6133.025218.9619.9751175.325
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013785
(v1.0)
A_51_P381360Ndufa13NM_02331267184
11P1.4550.165P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013785
(v1.0)
Ndufa1367184
220330