DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013795
GeneNdufab1
Synonyms8kDa
Desc.NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
LocusNM_028177 chr7:129231558-129245362(-)
DB links


Entrez 70316
MGI 1917566
Ensembl ENSMUSG00000030869
Vega OTTMUSG00000026510
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014246
(v2.0)
Ndufab1NM_02817770316
24.207732.005221.899510.07110.025320.62817.319842.65739.8688624.86
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013795
(v1.0)
Ndufab170316
Maternal RNA0.97542
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014246
(v2.0)
Ndufab170316
570/3720.1026404/3720.002874/3721.2444117/372-0.33527/372-1.6901269/372-1.0628
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014246
(v2.0)
Ndufab170316
269/1670.174190/1670.069569/1672.2455104/1670.640212/167-1.661130/167-0.9526
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014246
(v2.0)
Ndufab170316
72.079711960.57
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014246
(v2.0)
Ndufab170316
25.65267036.65
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013795
(v1.0)
Ndufab1NM_02817770316
33.240115.11587.505286.9507912.3853
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013795
(v1.0)
Ndufab1NM_02817770316
0.3859430.08233060.3044160.436711.68313
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013795
(v1.0)
Ndufab1NM_02817770316
34.75568.8530116.4917
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013795
(v1.0)
Ndufab1NM_02817770316
33.924914.96431.6414
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013795
(v1.0)
Ndufab1NM_02817770316
0.08352331.74539
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013795
(v1.0)
Ndufab1NM_02817770316
34.77588.7317534.7032
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013795
(v1.0)
Ndufab1NM_02817770316
6.948726.711276.76004
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013795
(v1.0)
Ndufab1NM_02817770316
0.4320570.605318
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013795
(v1.0)
Ndufab1NM_02817770316
1.3947620.8482
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013795
(v1.0)
Ndufab1NM_02817770316
56.063157.3117
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013795
(v1.0)
1428159_s_atMm.347976Ndufab1NM_028177.370316
635.825429.92500406.65
0013795
(v1.0)
1447919_x_atMm.347976Ndufab1NM_028177.370316
1204.15770.85449.7299.725933.95
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013795
(v1.0)
A_52_P1093473Ndufab1NM_02817770316
11P0.50.0909P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013795
(v1.0)
Ndufab170316
153163