DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013836
GeneNedd4l
SynonymsNedd4-2
Nedd4b
Desc.neural precursor cell expressed, developmentally down-regulated gene 4-like
LocusNM_001114386 chr18:65047410-65377480(+)
NM_031881 chr18:65183181-65377480(+)
DB links


Entrez 83814
MGI 1933754
Ensembl ENSMUSG00000024589
Featureprotein-coding
GO(BP)
  •   14 Terms
      negative regulation of systemic arterial blood pressure (GO:0003085)
      response to salt stress (GO:0009651)
      response to metal ion (GO:0010038)
      positive regulation of sodium ion transport (GO:0010765)
      negative regulation of sodium ion transport (GO:0010766)
      protein ubiquitination (GO:0016567)
      regulation of ion transmembrane transport (GO:0034765)
      regulation of membrane potential (GO:0042391)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
      ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (GO:0043162)
      positive regulation of protein catabolic process (GO:0045732)
      regulation of potassium ion transmembrane transporter activity (GO:1901016)
      regulation of tight junction assembly (GO:2000810)
      positive regulation of cation channel activity (GO:2001259)
GO(MF)
GO(CC)
KEGG
  •   3 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014287
(v2.0)
Nedd4lNM_001114386,NM_03188183814
6.1300410.953917.43885.920969.555540.7953783.3997714.58157.940561.01664
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013836
(v1.0)
Nedd4l83814
1-Cell Transient0.93534
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014287
(v2.0)
Nedd4l83814
846/4550.3812513/4550.0568117/4551.616464/4551.3547355/4551.69071574/4551.1894
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014287
(v2.0)
Nedd4l83814
491/1720.9963301/1720.688112/1722.8966424/1722.6154243/1722.5278961/1721.8767
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014287
(v2.0)
Nedd4l83814
89.279717850.16
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014287
(v2.0)
Nedd4l83814
8.8215899.91
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013836
(v1.0)
Nedd4lNM_001114386,NM_03188183814
11.385812.03454.406166.628492.39044
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013836
(v1.0)
Nedd4lFR041497,FR139946,FR247491,NM_001114386,NM_03188183814
726.4931021.27290.855514.96641.1274
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013836
(v1.0)
Nedd4lNM_001114386,NM_03188183814
11.90492.2418313.1299
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013836
(v1.0)
Nedd4lNM_001114386,NM_03188183814
11.620411.913710.8006
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013836
(v1.0)
Nedd4lFR041497,FR139946,FR247491,NM_001114386,NM_03188183814
1813.591812.77
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013836
(v1.0)
Nedd4lNM_001114386,NM_03188183814
11.91182.2111311.8457
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013836
(v1.0)
Nedd4lNM_001114386,NM_03188183814
4.079426.400075.50413
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013836
(v1.0)
Nedd4lFR041497,FR139946,FR247491,NM_001114386,NM_03188183814
259.171207.743
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013836
(v1.0)
Nedd4lNM_001114386,NM_03188183814
8.736347.0357
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013836
(v1.0)
Nedd4lNM_001114386,NM_03188183814
19.307815.0588
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013836
(v1.0)
1423269_a_atMm.98668Nedd4lNM_031881.2,NM_001114386.183814
1346.0251974561.125346.525523.325
0013836
(v1.0)
1457374_atMm.98668Nedd4lNM_031881.2,NM_001114386.183814
000431.825363.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013836
(v1.0)
A_51_P305936Nedd4lNM_03188183814
11P0.7680.443P
Proteome N/A