DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013913
GeneNfrkb
Synonyms
Desc.nuclear factor related to kappa B binding protein
LocusNM_172766 chr9:31193777-31228918(+)
DB links


Entrez 235134
MGI 2442410
Ensembl ENSMUSG00000042185
Vega OTTMUSG00000034118
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014368
(v2.0)
NfrkbNM_172766235134
4.8879677.950433.811723.984819.64674.374024.3230142.161714.13494.5891
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013913
(v1.0)
Nfrkb235134
Maternal RNA0.99012
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014368
(v2.0)
Nfrkb235134
566/3840.0468377/384-0.142483/3841.3635239/3840.643839/384-1.2208223/384-1.3774
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014368
(v2.0)
Nfrkb235134
286/1800.1544164/180-0.24981/1802.3726232/1801.683615/180-1.467194/180-1.5215
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014368
(v2.0)
Nfrkb235134
50.498213836.59
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014368
(v2.0)
Nfrkb235134
13.38359613.94
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013913
(v1.0)
NfrkbNM_172766235134
81.06223.397517.831813.60123.04609
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013913
(v1.0)
NfrkbFR060011,FR400673,NM_172766235134
493.903141.832106.44679.006421.7445
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013913
(v1.0)
NfrkbNM_172766235134
84.75781.7875825.5272
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013913
(v1.0)
NfrkbNM_172766235134
82.73223.162631.2833
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013913
(v1.0)
NfrkbFR060011,FR400673,NM_172766235134
220.796145.48
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013913
(v1.0)
NfrkbNM_172766235134
84.8071.7630934.3105
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013913
(v1.0)
NfrkbNM_172766235134
16.509513.13259.81876
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013913
(v1.0)
NfrkbFR060011,FR400673,NM_172766235134
224.54193.545
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013913
(v1.0)
NfrkbNM_172766235134
37.84133.53296
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013913
(v1.0)
NfrkbNM_172766235134
26.626120.7764
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013913
(v1.0)
22106L0941E04-3Mm.34792LOC235134235134
U010214NAP004282-002TC910707U,F,23.81873.57133.00873.16113.63283.28163.3344
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013913
(v1.0)
1434753_atMm.238146NfrkbNM_172766.3235134
1808.7752859.675810.65948.45733.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013913
(v1.0)
A_52_P357484NfrkbNM_172766235134
11P1.1960.327P
Proteome N/A