DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013914
GeneNfs1
Synonymsm-Nfs1
Desc.nitrogen fixation gene 1 (S. cerevisiae)
LocusNM_010911 chr2:155949373-155969922(-)
DB links


Entrez 18041
MGI 1316706
Ensembl ENSMUSG00000027618
Vega OTTMUSG00000016100
Featureprotein-coding
GO(BP)
  •   1 Terms
      iron incorporation into metallo-sulfur cluster (GO:0018283)
GO(MF)
  •   2 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014369
(v2.0)
Nfs1NM_01091118041
11.480822.596644.472421.650318.58912.099811.812848.068614.432313.4292
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013914
(v1.0)
Nfs118041
1-Cell Transient0.97501
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014369
(v2.0)
Nfs118041
627/3880.1792425/3880.0152196/3882.5788405/3881.387416/388-2.470194/388-2.6253
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014369
(v2.0)
Nfs118041
319/1650.436186/1650.0563190/1653.7098388/1652.54687/165-2.344549/165-2.3157
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014369
(v2.0)
Nfs118041
64.562513049.66
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014369
(v2.0)
Nfs118041
10.51177214.6
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013914
(v1.0)
Nfs1NM_01091118041
23.490230.864416.124612.89638.40361
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013914
(v1.0)
Nfs1NM_01091118041
30.045535.915619.204915.49810.4239
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013914
(v1.0)
Nfs1NM_01091118041
24.56114.1986633.6738
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013914
(v1.0)
Nfs1NM_01091118041
23.974130.554535.5888
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013914
(v1.0)
Nfs1NM_01091118041
36.47944.9248
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013914
(v1.0)
Nfs1NM_01091118041
24.57544.1411639.0325
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013914
(v1.0)
Nfs1NM_01091118041
14.928912.45199.97631
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013914
(v1.0)
Nfs1NM_01091118041
19.320312.6108
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013914
(v1.0)
Nfs1NM_01091118041
13.947624.4419
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013914
(v1.0)
Nfs1NM_01091118041
43.450741.7444
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013914
(v1.0)
15728K0231H09-3Mm.29169Nfs118041
U023552NAP104620-1Nfs1;TC793564Q9Z1J3U,F,24.13773.96173.65883.98783.28383.5673.4763
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013914
(v1.0)
1416373_atMm.283604Nfs1NM_010911.218041
346.45682.25335.475277.875326.075
0013914
(v1.0)
1431431_a_atMm.283604Nfs1NM_010911.218041
52.5576.383.82574.02578.125
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013914
(v1.0)
A_51_P315646Nfs1NM_01091118041
11P1.1180.465P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013914
(v1.0)
Nfs118041
141.3317.331.33