DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013932
GeneNhej1
Synonymscernunnos
XLF
Desc.nonhomologous end-joining factor 1
LocusNM_029342 chr1:75013920-75121800(-)
DB links


Entrez 75570
MGI 1922820
Ensembl ENSMUSG00000026162
Vega OTTMUSG00000021757
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014385
(v2.0)
Nhej1NM_02934275570
7.1879626.547937.25947.0218910.11233.807342.8856337.005111.40775.40478
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013932
(v1.0)
Nhej175570
Minor ZGA0.97113
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014385
(v2.0)
Nhej175570
593/447-0.1048325/447-0.574552/4470.4862130/447-0.447544/447-1.2679404/447-0.7431
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014385
(v2.0)
Nhej175570
283/206-0.0544150/206-0.570546/2061.3866107/2060.382211/206-2.072677/206-1.9979
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014385
(v2.0)
Nhej175570
52.245610450.24
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014385
(v2.0)
Nhej175570
16.03946524.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013932
(v1.0)
Nhej1NM_02934275570
27.586225.91535.216037.025662.02075
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013932
(v1.0)
Nhej1NM_02934275570
58.036448.13378.188078.956742.29271
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013932
(v1.0)
Nhej1NM_02934275570
28.84392.6287128.2742
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013932
(v1.0)
Nhej1NM_02934275570
28.154525.655127.3977
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013932
(v1.0)
Nhej1NM_02934275570
50.057850.5269
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013932
(v1.0)
Nhej1NM_02934275570
28.86072.5927130.0488
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013932
(v1.0)
Nhej1NM_02934275570
4.829236.783557.87446
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013932
(v1.0)
Nhej1NM_02934275570
8.8597212.4224
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013932
(v1.0)
Nhej1NM_02934275570
9.074926.63065
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013932
(v1.0)
Nhej1NM_02934275570
15.65645.65479
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013932
(v1.0)
20212L0529G02-31700029B21Rik75570
U021487NAP100388-001TC900171,TC865708Q99JK0U,F,23.05413.25032.65692.97312.73862.87952.4904
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013932
(v1.0)
1425651_atMm.482554Nhej1NM_029342.475570
41.55965.675052.375
0013932
(v1.0)
1429098_s_atMm.482554Nhej1NM_029342.475570
658.925348.55000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013932
(v1.0)
A_52_P1289641700029B21RikNM_02934275570
11P1.8440.103P
0013932
(v1.0)
A_52_P1289681700029B21RikNM_02934275570
11P2.410.0724P
Proteome N/A