DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013936
GeneNhlrc2
Synonyms
Desc.NHL repeat containing 2
LocusNM_025811 chr19:56622751-56673336(+)
DB links


Entrez 66866
MGI 1914116
Ensembl ENSMUSG00000025078
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014389
(v2.0)
Nhlrc2NM_02581166866
3.9826920.945120.52099.849496.658974.5390611.741417.45387.908073.61218
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013936
(v1.0)
Nhlrc266866
Maternal RNA0.95947
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014389
(v2.0)
Nhlrc266866
711/4350.1956499/4350.0816148/4352.0157327/4350.915662/435-0.7435366/435-0.8459
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014389
(v2.0)
Nhlrc266866
351/1540.6722220/1540.3961140/1543.3644303/1542.28914/154-1.3406126/154-0.881
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014389
(v2.0)
Nhlrc266866
118.672820557.89
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014389
(v2.0)
Nhlrc266866
30.478411326.97
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013936
(v1.0)
Nhlrc2NM_02581166866
21.775614.21627.331294.610698.27578
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013936
(v1.0)
Nhlrc2NM_02581166866
26.726915.80838.5125.457769.73088
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013936
(v1.0)
Nhlrc2NM_02581166866
22.76831.4565115.5102
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013936
(v1.0)
Nhlrc2NM_02581166866
22.224214.073512.9273
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013936
(v1.0)
Nhlrc2NM_02581166866
16.052414.8313
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013936
(v1.0)
Nhlrc2NM_02581166866
22.78161.4365614.1782
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013936
(v1.0)
Nhlrc2NM_02581166866
6.787644.451815.44707
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013936
(v1.0)
Nhlrc2NM_02581166866
5.398896.56267
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013936
(v1.0)
Nhlrc2NM_02581166866
7.455321.71725
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013936
(v1.0)
Nhlrc2NM_02581166866
4.40516.35546
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013936
(v1.0)
1938C0272A03-3Mm.463461200003G01Rik66866
U019598NAP004464-001TC820359Q9CW64U,F,23.35093.20832.67462.38272.39462.60032.8812
0013936
(v1.0)
22323L0956H08-3Mm.463461200003G01Rik66866
U019598NAP004464-001TC820359Q9CW64U,F,23.0083.11872.9253.03462.79732.96062.844
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013936
(v1.0)
1453048_atMm.392509Nhlrc266866
787.7639.650455.675740.075
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013936
(v1.0)
A_51_P270184Nhlrc2NM_02581166866
11P1.0220.866P
0013936
(v1.0)
A_52_P571661Nhlrc2NM_02581166866
11P1.1340.583P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013936
(v1.0)
Nhlrc266866
343466