DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013939
GeneNhp2
SynonymsD11Ertd175e
H/ACA small nucleolar RNPs
NHP2
Nola2
Desc.NHP2 ribonucleoprotein
LocusNM_026631 chr11:51433275-51437216(+)
DB links


Entrez 52530
MGI 1098547
Ensembl ENSMUSG00000001056
Vega OTTMUSG00000005610
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ribosome biogenesis in eukaryotes (mmu03008)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014392
(v2.0)
Nhp2NM_02663152530
69.569227.922715.9017143.035241.685377.22857.959428.8589237.666539.443
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013939
(v1.0)
Nhp252530
MGA0.97031
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014392
(v2.0)
Nhp252530
708/516-0.0563371/516-0.5907186/5162.1032781/5161.924121/516-2.5056194/516-2.0022
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014392
(v2.0)
Nhp252530
283/203-0.0333165/203-0.4129137/2032.9605531/2032.70357/203-2.636863/203-2.2602
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014392
(v2.0)
Nhp252530
70.189917739.66
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014392
(v2.0)
Nhp252530
22.94719723.66
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013939
(v1.0)
Nhp2NM_02663152530
29.022911.0537106.586167.84541.7243
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013939
(v1.0)
Nhp2NM_02663152530
39.852614.9286121.864194.21350.8666
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013939
(v1.0)
Nhp2NM_02663152530
30.346125.442212.0598
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013939
(v1.0)
Nhp2NM_02663152530
29.620810.942721.3976
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013939
(v1.0)
Nhp2NM_02663152530
43.600984.3548
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013939
(v1.0)
Nhp2NM_02663152530
30.363825.093723.4682
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013939
(v1.0)
Nhp2NM_02663152530
98.6817162.061164.167
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013939
(v1.0)
Nhp2NM_02663152530
187.223186.938
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013939
(v1.0)
Nhp2NM_02663152530
13.7073113.278
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013939
(v1.0)
Nhp2NM_02663152530
0.9142860.673924
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013939
(v1.0)
4816G0108F01-3Mm.28203D11Ertd175e52530
U012572NAP097834-001D11Ertd175e;TC880688,TC880687,TC880684Q9CRB2U,F,23.02893.20473.66964.14153.8414.11213.8435
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013939
(v1.0)
1416605_atMm.28203Nhp2NM_026631.352530
195.10447.21060.475627.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013939
(v1.0)
A_52_P313813Nola2NM_02663152530
11P0.2610.0777P
Proteome N/A