DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013950
GeneNin
Synonyms
Desc.ninein
LocusNM_001081453 chr12:71112422-71203841(-)
NM_008697 chr12:71119727-71212912(-)
DB links


Entrez 18080
MGI 105108
Ensembl ENSMUSG00000021068
Vega OTTMUSG00000037170
Featureprotein-coding
GO(BP)
  •   2 Terms
      microtubule anchoring at centrosome (GO:0034454)
      centrosome-templated microtubule nucleation (GO:0090222)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014403
(v2.0)
NinNM_001081453,NM_001286079,NM_001286080,NM_008697,NR_104397,NR_10439818080
6.10819114.665126.902115.596171.2591.382793.56624111.309155.7711.50774
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013950
(v1.0)
Nin18080
MGA0.99406
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014403
(v2.0)
Nin18080
567/439-0.1433373/439-0.350319/439-0.894442/439-2.028837/439-1.486218/439-1.6025
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014403
(v2.0)
Nin18080
242/191-0.1704141/191-0.550610/191-0.605813/191-2.457716/191-1.463386/191-1.7329
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014403
(v2.0)
Nin18080
117.860412495.05
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014403
(v2.0)
Nin18080
48.57165195.24
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013950
(v1.0)
NinNM_001081453,NM_00869718080
85.758663.903568.302888.8582.40555
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013950
(v1.0)
NinNM_001081453,NM_00869718080
1689.981288.521263.951412.9818.9165
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013950
(v1.0)
NinNM_001081453,NM_00869718080
89.66842.1619769.7201
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013950
(v1.0)
NinNM_001081453,NM_00869718080
87.525363.261958.6036
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013950
(v1.0)
NinNM_001081453,NM_00869718080
1702.71377.96
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013950
(v1.0)
NinNM_001081453,NM_00869718080
89.72052.1323664.2744
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013950
(v1.0)
NinNM_001081453,NM_00869718080
63.237785.79681.7693
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013950
(v1.0)
NinNM_001081453,NM_00869718080
833.345732.549
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013950
(v1.0)
NinNM_001081453,NM_00869718080
46.301764.1383
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013950
(v1.0)
NinNM_001081453,NM_00869718080
8.2162213.6105
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013950
(v1.0)
8789H3072B09-3Mm.275403110068G20Rik73198
U034043NAP013541-001Nin;TC795009Q61043U,F,24.02924.093.16663.57232.99993.04332.5173
0013950
(v1.0)
10398H3095C12-3Mm.4569Nin18080
U034043NAP033717-1Nin;TC893864,TC893860Q61043U,F,23.52013.52483.94464.34913.69083.71973.1919
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013950
(v1.0)
1419078_atMm.244047NinNM_001081453.1,NM_008697.218080
883.275274.7658.651030.2557
0013950
(v1.0)
1428600_atMm.244047NinNM_001081453.1,NM_008697.218080
906.651088.825870.85676.7250
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013950
(v1.0)
Nin18080
010010