DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013962
GeneNipsnap1
Synonyms
Desc.4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)
LocusNM_008698 chr11:4774006-4794203(+)
DB links


Entrez 18082
MGI 1278344
Ensembl ENSMUSG00000034285
Vega OTTMUSG00000005074
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014415
(v2.0)
Nipsnap1NM_00869818082
3.10348.468755.23859.730499.2467147.741513.569165.45158.7350751.6023
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013962
(v1.0)
Nipsnap118082
Maternal RNA0.97891
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014415
(v2.0)
Nipsnap118082
601/4210.0007369/421-0.305648/4210.4571207/4210.3055175/4210.78531096/4210.7796
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014415
(v2.0)
Nipsnap118082
329/2070.1549188/207-0.253843/2071.2848173/2071.0633114/2071.1811605/2070.9446
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014415
(v2.0)
Nipsnap118082
53.07849953.61
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014415
(v2.0)
Nipsnap118082
20.23366431.61
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013962
(v1.0)
Nipsnap1NM_00869818082
50.381138.22617.238526.404169.57427
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013962
(v1.0)
Nipsnap1NM_00869818082
1349.73919.652422.666353.354165.672
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013962
(v1.0)
Nipsnap1NM_00869818082
52.6781.134841.7055
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013962
(v1.0)
Nipsnap1NM_00869818082
51.41937.842348.4414
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013962
(v1.0)
Nipsnap1NM_00869818082
627.9651025.75
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013962
(v1.0)
Nipsnap1NM_00869818082
52.70861.1192653.1289
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013962
(v1.0)
Nipsnap1NM_00869818082
6.701746.183476.08306
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013962
(v1.0)
Nipsnap1NM_00869818082
367.214158.346
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013962
(v1.0)
Nipsnap1NM_00869818082
11.3762.11408
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013962
(v1.0)
Nipsnap1NM_00869818082
10.773212.604
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013962
(v1.0)
2926C0454F07-3Mm.16958Nipsnap118082
U012276NAP004996-001Nipsnap1;TC825395,TC825389O551253.24883.15583.14023.47113.60653.31333.5567
0013962
(v1.0)
15179K0105C12-3Mm.16958Nipsnap118082
U012276NAP004996-001Nipsnap1;TC825389O551252.85982.64022.81522.71373.01882.73292.8259
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013962
(v1.0)
1448465_atMm.293716Nipsnap1NM_008698.218082
561.675486137.27591.92581.2
0013962
(v1.0)
1456748_a_atMm.293716Nipsnap1NM_008698.218082
192.2750000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013962
(v1.0)
A_51_P214516Nipsnap1NM_00869818082
11P0.5680.122P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0013962
(v1.0)
Nipsnap118082
1.53.52245