DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013980
GeneNkrf
Synonyms
Desc.NF-kappaB repressing factor
LocusNM_029891 chrX:34427537-34442894(-)
DB links


Entrez 77286
MGI 1924536
Ensembl ENSMUSG00000044149
Vega OTTMUSG00000017111
Featureprotein-coding
GO(BP)
  •   3 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      negative regulation of transcription, DNA-dependent (GO:0045892)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014433
(v2.0)
NkrfNM_02989177286
3.0604518.516520.578514.892915.57393.931693.3558515.518120.25215.25428
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013980
(v1.0)
Nkrf77286
1-Cell Transient0.95336
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014433
(v2.0)
Nkrf77286
340/2120.1679231/2120.007678/2122.0966237/2121.481230/212-0.744198/212-0.6937
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014433
(v2.0)
Nkrf77286
198/950.5419107/950.054872/953.0476207/952.424211/95-0.98953/95-1.4157
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014433
(v2.0)
Nkrf77286
45.33489945.79
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014433
(v2.0)
Nkrf77286
13.42576520.65
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013980
(v1.0)
NkrfNM_02989177286
19.242614.19811.072510.82322.31102
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013980
(v1.0)
NkrfNM_02989177286
25.224317.114114.373914.13092.90412
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013980
(v1.0)
NkrfNM_02989177286
20.11991.1192415.4903
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013980
(v1.0)
NkrfNM_02989177286
19.63914.055411.4867
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013980
(v1.0)
NkrfNM_02989177286
15.62512.9802
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013980
(v1.0)
NkrfNM_02989177286
20.13161.1039112.5983
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013980
(v1.0)
NkrfNM_02989177286
10.251410.450214.0407
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013980
(v1.0)
NkrfNM_02989177286
14.923919.0275
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013980
(v1.0)
NkrfNM_02989177286
19.820223.133
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013980
(v1.0)
NkrfNM_02989177286
0.9569210.56428
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013980
(v1.0)
1434398_atMm.21649NkrfNM_029891.277286
629.65359.65555.2469.95359.85
Agilent44K N/A
Proteome N/A