DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014013
GeneNlrp4a
SynonymsNalp-eta
Nalp4a
Desc.NLR family, pyrin domain containing 4A
LocusNM_172896 chr7:27220132-27260477(+)
DB links


Entrez 243880
MGI 2443697
Ensembl ENSMUSG00000040601
Vega OTTMUSG00000027159
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014467
(v2.0)
Nlrp4aNM_172896243880
0372.648609.27741.704321.80070.2427930.0323281377.61530.8060.113468
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014013
(v1.0)
Nlrp4a243880
Maternal RNA0.94014
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014467
(v2.0)
Nlrp4a243880
572/3500.1953435/3500.19695/350-2.3144107/350-0.375453/350-0.6556325/350-0.7037
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014467
(v2.0)
Nlrp4a243880
223/1440.1174152/144-0.03792/144-2.100641/144-0.471321/144-0.6938113/144-0.9399
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014467
(v2.0)
Nlrp4a243880
34.51363695.87
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014467
(v2.0)
Nlrp4a243880
21.22422296.47
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014013
(v1.0)
Nlrp4aNM_172896243880
387.244421.95131.086615.11810.0247744
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014013
(v1.0)
Nlrp4aNM_172896243880
585.479541.42371.506463.99130.00962365
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014013
(v1.0)
Nlrp4aNM_172896243880
404.8990460.358
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014013
(v1.0)
Nlrp4aNM_172896243880
395.221417.714279.727
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014013
(v1.0)
Nlrp4aNM_172896243880
593.68346.749
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014013
(v1.0)
Nlrp4aNM_172896243880
405.1340306.795
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014013
(v1.0)
Nlrp4aNM_172896243880
28.781414.597121.4613
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014013
(v1.0)
Nlrp4aNM_172896243880
16.528523.5591
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014013
(v1.0)
Nlrp4aNM_172896243880
220.45113.0291
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014013
(v1.0)
Nlrp4aNM_172896243880
85.372698.816
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014013
(v1.0)
1438077_atMm.322356Nlrp4aNM_172896.2243880
9837.513391.0253165.72500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014013
(v1.0)
A_51_P113322Nalp4aNM_172896243880
11P1.2090.309P
0014013
(v1.0)
A_52_P310548Nalp4aNM_172896243880
11P1.0390.767P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014013
(v1.0)
Nlrp4a243880
13206367019