DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014019
GeneNlrp5
SynonymsMater
Nalp5
Op1
Desc.NLR family, pyrin domain containing 5
LocusNM_011860 chr7:24170916-24226940(+)
NM_001039143 chr7:24170916-24226940(+)
DB links


Entrez 23968
MGI 1345193
Ensembl ENSMUSG00000015721
Vega OTTMUSG00000024411
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014473
(v2.0)
Nlrp5NM_001039143,NM_01186023968
0.428255416.587209.71636.44921.95100.0152119198.85532.55350
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014019
(v1.0)
Nlrp523968
Maternal RNA0.89959
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014473
(v2.0)
Nlrp523968
510/3420.0635430/3420.213613/342-1.0597114/342-0.251742/342-0.9513262/342-0.9797
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014473
(v2.0)
Nlrp523968
221/1510.0364168/1510.03758/151-0.578948/151-0.316332/151-0.1755183/151-0.3197
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014473
(v2.0)
Nlrp523968
33.12437146.65
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014473
(v2.0)
Nlrp523968
11.05214425.12
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014019
(v1.0)
Nlrp5NM_001039143,NM_01186023968
433.011145.68827.169115.23540.00979383
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014019
(v1.0)
Nlrp5NM_001039143,NM_01186023968
473.177152.20426.912617.19810.0110498
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014019
(v1.0)
Nlrp5NM_001039143,NM_01186023968
452.7520.156623158.948
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014019
(v1.0)
Nlrp5NM_001039143,NM_01186023968
441.931144.225147.565
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014019
(v1.0)
Nlrp5NM_001039143,NM_01186023968
137.819144.37
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014019
(v1.0)
Nlrp5NM_001039143,NM_01186023968
453.0150.154477161.844
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014019
(v1.0)
Nlrp5NM_001039143,NM_01186023968
25.154314.710422.6937
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014019
(v1.0)
Nlrp5NM_001039143,NM_01186023968
14.444123.1755
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014019
(v1.0)
Nlrp5NM_001039143,NM_01186023968
178.15810.8891
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014019
(v1.0)
Nlrp5NM_001039143,NM_01186023968
31.629315.0441
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014019
(v1.0)
10713H3102E07-3Mm.11741Mater23968
U007778NAP094406-001Mater;TC865550,TC865549Q9R1M5U,F4.18434.36024.08234.08213.78783.69783.6594
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014019
(v1.0)
1418882_atMm.333653Nlrp5NM_011860.2,NM_001039143.123968
4956.9252276.025898.97500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014019
(v1.0)
A_51_P415293Nalp5NM_01186023968
11P1.2390.314P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014019
(v1.0)
Nlrp523968
59.33106.6721.33675.332444.67210.67