DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014022
GeneNlrp9b
SynonymsNalp-delta
Nalp9b
Desc.NLR family, pyrin domain containing 9B
LocusNM_194058 chr7:20593372-20648287(+)
DB links


Entrez 243874
MGI 2675377
Ensembl ENSMUSG00000060508
Vega OTTMUSG00000027189
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014477
(v2.0)
Nlrp9bNM_194058243874
0.285747308.692288.02711.58625.207360.2071090.0720835196.7312.83450.0374602
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014022
(v1.0)
Nlrp9b243874
Maternal RNA0.99774
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014477
(v2.0)
Nlrp9b243874
464/3170.0367355/3170.0471/317-3.761555/317-1.1811111/3170.538819/3170.7682
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014477
(v2.0)
Nlrp9b243874
244/1620.0776197/1620.1651/162-2.84324/162-1.386956/1620.5142446/1620.8577
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014477
(v2.0)
Nlrp9b243874
38.15294193.06
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014477
(v2.0)
Nlrp9b243874
19.52952097.65
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014022
(v1.0)
Nlrp9bNM_194058243874
320.741199.1888.634683.594580.0513592
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014022
(v1.0)
Nlrp9bNM_194058243874
381.52214.6829.69064.115310.0590973
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014022
(v1.0)
Nlrp9bNM_194058243874
335.3650.1045217.319
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014022
(v1.0)
Nlrp9bNM_194058243874
327.349197.188145.715
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014022
(v1.0)
Nlrp9bNM_194058243874
218.01163.535
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014022
(v1.0)
Nlrp9bNM_194058243874
335.5590.103069159.816
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014022
(v1.0)
Nlrp9bNM_194058243874
7.994373.470719.02801
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014022
(v1.0)
Nlrp9bNM_194058243874
4.0710410.851
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014022
(v1.0)
Nlrp9bNM_194058243874
1045.2917.6237
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014022
(v1.0)
Nlrp9bNM_194058243874
37.359816.147
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014022
(v1.0)
8618H3069A01-3243874
U042790NAP097913-001TC883193U,F3.62173.69363.21462.82142.82312.73022.7539
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014022
(v1.0)
1457084_atMm.277114Nlrp9bNM_194058.2243874
1999.31751.925463.500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014022
(v1.0)
A_52_P353155Nalp9bNM_194058243874
11P0.340.0961P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014022
(v1.0)
Nlrp9b243874
253212489071