DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014023
GeneNlrp9c
SynonymsNalp-zeta
Nalp9c
Desc.NLR family, pyrin domain containing 9C
LocusNM_001042612 chr7:27149906-27179262(-)
DB links


Entrez 330490
MGI 3028627
Ensembl ENSMUSG00000040614
Vega OTTMUSG00000033294
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014478
(v2.0)
Nlrp9cNM_001042612330490
0130.348215.81424.95546.193010.01017920.0240629140.1459.884910
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014023
(v1.0)
Nlrp9c330490
Minor ZGA0.98389
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014478
(v2.0)
Nlrp9c330490
385/2280.242354/2280.51666/228-1.499376/228-0.250731/228-0.8012189/228-0.8648
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014478
(v2.0)
Nlrp9c330490
192/1070.3279174/1070.58085/107-0.710444/1070.048113/107-0.931476/107-1.0778
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014478
(v2.0)
Nlrp9c330490
33.93533889.3
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014478
(v2.0)
Nlrp9c330490
10.40271194.57
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014023
(v1.0)
Nlrp9cNM_001042612330490
135.43148.88118.58294.282060.0162766
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014023
(v1.0)
Nlrp9cFR166947,NM_001042612330490
156.923154.55120.81665.000780.020075
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014023
(v1.0)
Nlrp9cNM_001042612330490
141.6040162.433
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014023
(v1.0)
Nlrp9cNM_001042612330490
138.22147.386103.726
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014023
(v1.0)
Nlrp9cFR166947,NM_001042612330490
156.964111.688
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014023
(v1.0)
Nlrp9cNM_001042612330490
141.6870113.763
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014023
(v1.0)
Nlrp9cNM_001042612330490
17.20494.13456.89829
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014023
(v1.0)
Nlrp9cFR166947,NM_001042612330490
4.94697.89586
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014023
(v1.0)
Nlrp9cNM_001042612330490
112.48147.2128
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014023
(v1.0)
Nlrp9cNM_001042612330490
31.622839.6504
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014023
(v1.0)
1439217_atMm.212174Nlrp9cNM_001042612.1330490
3087.4753880.15154600
0014023
(v1.0)
1439636_atMm.212174Nlrp9cNM_001042612.1330490
47496390.12726.42500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014023
(v1.0)
A_52_P167935Nalp9cNM_194062330490
11P0.7310.204P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014023
(v1.0)
Nlrp9c330490
33.5044.50