DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014112
GeneNpc2
SynonymsHE1
Desc.Niemann Pick type C2
LocusNM_023409 chr12:86095509-86114062(-)
DB links


Entrez 67963
MGI 1915213
Ensembl ENSMUSG00000021242
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014568
(v2.0)
Npc2NM_02340967963
264.8822.278522.638763.8279107.929120.11934.606215.826292.14131.234
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014112
(v1.0)
Npc267963
MGA0.99733
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014568
(v2.0)
Npc267963
565/413-0.0606397/413-0.1728101/4131.5417292/4130.827320/413-2.2544135/413-2.1999
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014568
(v2.0)
Npc267963
275/1860.051168/186-0.261597/1862.5854277/1861.89177/186-2.513333/186-3.0371
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014568
(v2.0)
Npc267963
74.172215248.8
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014568
(v2.0)
Npc267963
29.443610528.04
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014112
(v1.0)
Npc2NM_02340967963
23.161115.742547.591574.86224.5175
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014112
(v1.0)
Npc2FR320500,NM_02340967963
197.42190.5539355.725607.487173.997
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014112
(v1.0)
Npc2NM_02340967963
24.21796.869217.1754
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014112
(v1.0)
Npc2NM_02340967963
23.638215.584411.7289
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014112
(v1.0)
Npc2FR320500,NM_02340967963
17.675613.697
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014112
(v1.0)
Npc2NM_02340967963
24.231195.542512.8639
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014112
(v1.0)
Npc2NM_02340967963
44.062472.282363.5562
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014112
(v1.0)
Npc2FR320500,NM_02340967963
297.075266.032
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014112
(v1.0)
Npc2NM_02340967963
5.9410223.0095
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014112
(v1.0)
Npc2NM_02340967963
9.889717.30992
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014112
(v1.0)
9167H3077D05-3Mm.29454Npc267963
U034175NAP006969-001Npc2;TC885778Q9Z0J0U,F,23.36533.34383.59793.90613.63313.88823.7542
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014112
(v1.0)
1448513_a_atMm.282556Npc2NM_023409.467963
1444.2950.2252064.6256455.054485.625
0014112
(v1.0)
1455768_atMm.282556Npc2NM_023409.467963
000441.4243.175
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014112
(v1.0)
A_51_P347961Npc2NM_02340967963
11P0.2360.0705P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014112
(v1.0)
Npc267963
043043