DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014127
GeneNploc4
Synonyms
Desc.nuclear protein localization 4 homolog (S. cerevisiae)
LocusNM_199469 chr11:120241112-120299014(-)
NM_001195023 chr11:120241112-120299014(-)
DB links


Entrez 217365
MGI 2679787
Ensembl ENSMUSG00000039703
Vega OTTMUSG00000004173
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014583
(v2.0)
Nploc4NM_001195023,NM_199469217365
16.087665.184375.403336.62950.476611.027721.04674.616945.606213.0763
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014127
(v1.0)
Nploc4217365
Maternal RNA0.92354
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014583
(v2.0)
Nploc4217365
794/4390.3414567/4390.2524275/4392.8922857/4392.289861/439-0.7797591/439-0.17
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014583
(v2.0)
Nploc4217365
387/1390.9594267/1390.8211261/1394.3948803/1393.837515/139-1.1037173/139-0.2814
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014583
(v2.0)
Nploc4217365
82.486512466.52
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014583
(v2.0)
Nploc4217365
19.22415932.58
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014127
(v1.0)
Nploc4NM_001195023,NM_199469217365
67.766352.291527.23535.001214.9938
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014127
(v1.0)
Nploc4FR062459,FR359756,NM_001195023,NM_199469217365
383.057238.419105.937114.60956.9695
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014127
(v1.0)
Nploc4NM_001195023,NM_199469217365
70.85595.8833857.0511
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014127
(v1.0)
Nploc4NM_001195023,NM_199469217365
69.162451.766455.2951
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014127
(v1.0)
Nploc4FR062459,FR359756,NM_001195023,NM_199469217365
62.314766.6154
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014127
(v1.0)
Nploc4NM_001195023,NM_199469217365
70.89715.802860.6458
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014127
(v1.0)
Nploc4NM_001195023,NM_199469217365
25.215433.79531.5895
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014127
(v1.0)
Nploc4FR062459,FR359756,NM_001195023,NM_199469217365
46.007241.9913
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014127
(v1.0)
Nploc4NM_001195023,NM_199469217365
35.16868.57847
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014127
(v1.0)
Nploc4NM_001195023,NM_199469217365
1.694651.23154
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014127
(v1.0)
7631H3051A08-3Mm.15125217365
U033712NAP096129-001TC848012P97300U,F,23.10853.24543.33823.52973.34943.52483.3061
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014127
(v1.0)
1454804_atMm.309520Nploc4NM_001195023.1,NM_199469.2217365
188.7162.675145.275125.425100.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014127
(v1.0)
A_52_P275750AK129375NM_199469217365
11P0.4610.104P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014127
(v1.0)
Nploc4217365
221231